Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stra6O70491 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stra6O70491 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stra6O70491 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.2■□□□□ 0.66
Stra6O70491 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stra6O70491 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stra6O70491 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stra6O70491 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.2■□□□□ 0.66
Stra6O70491 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stra6O70491 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stra6O70491 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stra6O70491 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Stra6O70491 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra6O70491 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra6O70491 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra6O70491 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra6O70491 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Stra6O70491 Gm7284-201ENSMUST00000131667 944 ntBASIC19.19■□□□□ 0.66
Stra6O70491 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.19■□□□□ 0.66
Stra6O70491 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.19■□□□□ 0.66
Stra6O70491 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Stra6O70491 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra6O70491 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra6O70491 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra6O70491 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Stra6O70491 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.19■□□□□ 0.66
Stra6O70491 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra6O70491 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stra6O70491 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.18■□□□□ 0.66
Stra6O70491 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Gm29518-201ENSMUST00000190858 372 ntBASIC19.18■□□□□ 0.66
Stra6O70491 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stra6O70491 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra6O70491 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra6O70491 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Stra6O70491 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra6O70491 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra6O70491 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra6O70491 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra6O70491 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra6O70491 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra6O70491 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra6O70491 Gm14859-201ENSMUST00000117752 357 ntBASIC19.17■□□□□ 0.66
Stra6O70491 Gm9013-201ENSMUST00000132939 882 ntBASIC19.17■□□□□ 0.66
Stra6O70491 Gm26039-201ENSMUST00000158152 144 ntBASIC19.17■□□□□ 0.66
Stra6O70491 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra6O70491 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Stra6O70491 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stra6O70491 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra6O70491 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra6O70491 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.16■□□□□ 0.66
Stra6O70491 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra6O70491 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra6O70491 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra6O70491 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra6O70491 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Stra6O70491 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra6O70491 Gm27704-201ENSMUST00000185094 107 ntBASIC19.16■□□□□ 0.66
Stra6O70491 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.16■□□□□ 0.66
Stra6O70491 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra6O70491 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Stra6O70491 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Stra6O70491 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra6O70491 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra6O70491 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stra6O70491 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Stra6O70491 Actl10-202ENSMUST00000226583 1501 ntBASIC19.15■□□□□ 0.66
Stra6O70491 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Stra6O70491 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stra6O70491 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stra6O70491 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stra6O70491 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Stra6O70491 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stra6O70491 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Stra6O70491 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.15■□□□□ 0.66
Stra6O70491 Gm9103-201ENSMUST00000119371 405 ntBASIC19.15■□□□□ 0.66
Stra6O70491 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Stra6O70491 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.15■□□□□ 0.66
Stra6O70491 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stra6O70491 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stra6O70491 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stra6O70491 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stra6O70491 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Stra6O70491 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms