Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim1O70400 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim1O70400 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim1O70400 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim1O70400 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim1O70400 Gm17661-201ENSMUST00000170317 270 ntBASIC17.13■□□□□ 0.33
Pdlim1O70400 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.13■□□□□ 0.33
Pdlim1O70400 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pdlim1O70400 Gm37055-201ENSMUST00000191866 133 ntBASIC17.13■□□□□ 0.33
Pdlim1O70400 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.13■□□□□ 0.33
Pdlim1O70400 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim1O70400 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim1O70400 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.13■□□□□ 0.33
Pdlim1O70400 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim1O70400 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim1O70400 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim1O70400 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.13■□□□□ 0.33
Pdlim1O70400 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim1O70400 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pdlim1O70400 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pdlim1O70400 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Pdlim1O70400 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pdlim1O70400 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.12■□□□□ 0.33
Pdlim1O70400 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pdlim1O70400 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.12■□□□□ 0.33
Pdlim1O70400 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.12■□□□□ 0.33
Pdlim1O70400 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.12■□□□□ 0.33
Pdlim1O70400 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.12■□□□□ 0.33
Pdlim1O70400 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.12■□□□□ 0.33
Pdlim1O70400 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim1O70400 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pdlim1O70400 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Pdlim1O70400 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.11■□□□□ 0.33
Pdlim1O70400 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.11■□□□□ 0.33
Pdlim1O70400 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 Gm7638-201ENSMUST00000121348 967 ntBASIC17.11■□□□□ 0.33
Pdlim1O70400 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.11■□□□□ 0.33
Pdlim1O70400 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.11■□□□□ 0.33
Pdlim1O70400 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Pdlim1O70400 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.11■□□□□ 0.33
Pdlim1O70400 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pdlim1O70400 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim1O70400 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pdlim1O70400 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pdlim1O70400 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pdlim1O70400 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.1■□□□□ 0.33
Pdlim1O70400 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pdlim1O70400 Gm9731-201ENSMUST00000209480 747 ntBASIC17.1■□□□□ 0.33
Pdlim1O70400 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.1■□□□□ 0.33
Pdlim1O70400 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Gm5417-201ENSMUST00000079706 384 ntBASIC17.1■□□□□ 0.33
Pdlim1O70400 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.1■□□□□ 0.33
Pdlim1O70400 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.1■□□□□ 0.33
Pdlim1O70400 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim1O70400 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.1■□□□□ 0.33
Pdlim1O70400 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.1■□□□□ 0.33
Pdlim1O70400 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim1O70400 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim1O70400 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.09■□□□□ 0.33
Pdlim1O70400 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim1O70400 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim1O70400 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.09■□□□□ 0.33
Pdlim1O70400 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.09■□□□□ 0.33
Pdlim1O70400 Il3ra-202ENSMUST00000223589 738 ntBASIC17.09■□□□□ 0.33
Pdlim1O70400 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms