Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Chrna4O70174 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chrna4O70174 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.53■□□□□ 0.4
Chrna4O70174 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna4O70174 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna4O70174 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna4O70174 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.52■□□□□ 0.4
Chrna4O70174 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna4O70174 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna4O70174 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna4O70174 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna4O70174 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.52■□□□□ 0.4
Chrna4O70174 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.52■□□□□ 0.4
Chrna4O70174 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna4O70174 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna4O70174 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Chrna4O70174 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna4O70174 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna4O70174 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Chrna4O70174 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna4O70174 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna4O70174 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna4O70174 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna4O70174 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.51■□□□□ 0.39
Chrna4O70174 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna4O70174 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Chrna4O70174 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.51■□□□□ 0.39
Chrna4O70174 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna4O70174 Mir1199-201ENSMUST00000117015 119 ntBASIC17.51■□□□□ 0.39
Chrna4O70174 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna4O70174 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.51■□□□□ 0.39
Chrna4O70174 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna4O70174 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.51■□□□□ 0.39
Chrna4O70174 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chrna4O70174 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna4O70174 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna4O70174 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna4O70174 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.5■□□□□ 0.39
Chrna4O70174 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.5■□□□□ 0.39
Chrna4O70174 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.5■□□□□ 0.39
Chrna4O70174 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Chrna4O70174 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna4O70174 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.5■□□□□ 0.39
Chrna4O70174 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna4O70174 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.49■□□□□ 0.39
Chrna4O70174 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna4O70174 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.49■□□□□ 0.39
Chrna4O70174 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna4O70174 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna4O70174 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna4O70174 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chrna4O70174 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna4O70174 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.49■□□□□ 0.39
Chrna4O70174 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Chrna4O70174 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna4O70174 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.49■□□□□ 0.39
Chrna4O70174 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Chrna4O70174 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna4O70174 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna4O70174 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna4O70174 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna4O70174 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna4O70174 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna4O70174 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna4O70174 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.48■□□□□ 0.39
Chrna4O70174 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Chrna4O70174 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.48■□□□□ 0.39
Chrna4O70174 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna4O70174 Gm24841-201ENSMUST00000158676 357 ntBASIC17.48■□□□□ 0.39
Chrna4O70174 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.48■□□□□ 0.39
Chrna4O70174 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna4O70174 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.48■□□□□ 0.39
Chrna4O70174 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Chrna4O70174 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna4O70174 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chrna4O70174 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.47■□□□□ 0.39
Chrna4O70174 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna4O70174 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna4O70174 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna4O70174 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna4O70174 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna4O70174 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna4O70174 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms