Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.64■□□□□ 0.41
Limk2O54785 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.64■□□□□ 0.41
Limk2O54785 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Limk2O54785 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Limk2O54785 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.63■□□□□ 0.41
Limk2O54785 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.63■□□□□ 0.41
Limk2O54785 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Limk2O54785 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Limk2O54785 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Limk2O54785 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Limk2O54785 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.63■□□□□ 0.41
Limk2O54785 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Limk2O54785 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Limk2O54785 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Limk2O54785 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Limk2O54785 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.62■□□□□ 0.41
Limk2O54785 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.62■□□□□ 0.41
Limk2O54785 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Limk2O54785 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Limk2O54785 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Limk2O54785 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Limk2O54785 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Limk2O54785 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Limk2O54785 Odf3b-204ENSMUST00000227834 930 ntBASIC17.61■□□□□ 0.41
Limk2O54785 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Limk2O54785 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Limk2O54785 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Limk2O54785 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Limk2O54785 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Limk2O54785 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Limk2O54785 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Limk2O54785 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Limk2O54785 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.6■□□□□ 0.41
Limk2O54785 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Limk2O54785 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Limk2O54785 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Limk2O54785 Gm13559-201ENSMUST00000120476 863 ntBASIC17.6■□□□□ 0.41
Limk2O54785 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Limk2O54785 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.6■□□□□ 0.41
Limk2O54785 Timm23-208ENSMUST00000226683 750 ntBASIC17.6■□□□□ 0.41
Limk2O54785 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Limk2O54785 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Limk2O54785 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Limk2O54785 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Limk2O54785 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.6■□□□□ 0.41
Limk2O54785 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Limk2O54785 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Limk2O54785 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Limk2O54785 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.59■□□□□ 0.41
Limk2O54785 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.59■□□□□ 0.41
Limk2O54785 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms