Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc4O35988 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sdc4O35988 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.91■□□□□ 0.46
Sdc4O35988 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc4O35988 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Sdc4O35988 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc4O35988 Mir5130-201ENSMUST00000175160 84 ntBASIC17.91■□□□□ 0.46
Sdc4O35988 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc4O35988 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.91■□□□□ 0.46
Sdc4O35988 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc4O35988 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Sdc4O35988 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc4O35988 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc4O35988 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc4O35988 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc4O35988 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc4O35988 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc4O35988 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc4O35988 Gm9731-201ENSMUST00000209480 747 ntBASIC17.9■□□□□ 0.46
Sdc4O35988 Gm7791-201ENSMUST00000219066 539 ntBASIC17.9■□□□□ 0.46
Sdc4O35988 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc4O35988 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.9■□□□□ 0.46
Sdc4O35988 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc4O35988 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc4O35988 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc4O35988 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.9■□□□□ 0.46
Sdc4O35988 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc4O35988 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Sdc4O35988 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sdc4O35988 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Sdc4O35988 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Sdc4O35988 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sdc4O35988 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Sdc4O35988 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Sdc4O35988 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.89■□□□□ 0.45
Sdc4O35988 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.89■□□□□ 0.45
Sdc4O35988 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Sdc4O35988 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Sdc4O35988 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Sdc4O35988 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc4O35988 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Sdc4O35988 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.88■□□□□ 0.45
Sdc4O35988 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Sdc4O35988 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc4O35988 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc4O35988 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc4O35988 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc4O35988 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.88■□□□□ 0.45
Sdc4O35988 Gm16061-201ENSMUST00000122167 857 ntBASIC17.88■□□□□ 0.45
Sdc4O35988 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc4O35988 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc4O35988 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc4O35988 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc4O35988 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Sdc4O35988 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc4O35988 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc4O35988 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc4O35988 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.88■□□□□ 0.45
Sdc4O35988 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc4O35988 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Sdc4O35988 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc4O35988 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc4O35988 Gm13474-201ENSMUST00000122466 815 ntBASIC17.87■□□□□ 0.45
Sdc4O35988 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.87■□□□□ 0.45
Sdc4O35988 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sdc4O35988 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Sdc4O35988 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc4O35988 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc4O35988 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sdc4O35988 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc4O35988 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sdc4O35988 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.87■□□□□ 0.45
Sdc4O35988 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc4O35988 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Sdc4O35988 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.86■□□□□ 0.45
Sdc4O35988 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc4O35988 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc4O35988 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc4O35988 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc4O35988 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc4O35988 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sdc4O35988 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc4O35988 Gm10013-201ENSMUST00000106074 672 ntBASIC17.86■□□□□ 0.45
Sdc4O35988 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc4O35988 Il3ra-202ENSMUST00000223589 738 ntBASIC17.86■□□□□ 0.45
Sdc4O35988 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms