Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Clcn6O35454 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn6O35454 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn6O35454 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn6O35454 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.47■□□□□ 0.55
Clcn6O35454 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn6O35454 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Clcn6O35454 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.46■□□□□ 0.55
Clcn6O35454 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Clcn6O35454 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Gm25026-201ENSMUST00000175017 188 ntBASIC18.46■□□□□ 0.55
Clcn6O35454 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC18.46■□□□□ 0.55
Clcn6O35454 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.46■□□□□ 0.55
Clcn6O35454 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.46■□□□□ 0.55
Clcn6O35454 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Clcn6O35454 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn6O35454 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Clcn6O35454 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.45■□□□□ 0.54
Clcn6O35454 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Clcn6O35454 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.45■□□□□ 0.54
Clcn6O35454 Gm44772-201ENSMUST00000207623 1191 ntBASIC18.45■□□□□ 0.54
Clcn6O35454 AC125117.2-201ENSMUST00000228344 1140 ntBASIC18.45■□□□□ 0.54
Clcn6O35454 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.45■□□□□ 0.54
Clcn6O35454 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn6O35454 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.44■□□□□ 0.54
Clcn6O35454 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Clcn6O35454 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC18.44■□□□□ 0.54
Clcn6O35454 Gm37213-201ENSMUST00000193077 586 ntBASIC18.44■□□□□ 0.54
Clcn6O35454 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn6O35454 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn6O35454 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn6O35454 Gm11858-201ENSMUST00000117935 838 ntBASIC18.43■□□□□ 0.54
Clcn6O35454 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn6O35454 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn6O35454 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn6O35454 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn6O35454 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Clcn6O35454 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn6O35454 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn6O35454 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.43■□□□□ 0.54
Clcn6O35454 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn6O35454 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn6O35454 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn6O35454 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn6O35454 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Clcn6O35454 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn6O35454 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.42■□□□□ 0.54
Clcn6O35454 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC18.42■□□□□ 0.54
Clcn6O35454 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn6O35454 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn6O35454 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Clcn6O35454 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms