Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf11aO35305 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Gm21814-202ENSMUST00000203277 873 ntBASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf11aO35305 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Gm38027-201ENSMUST00000192315 235 ntBASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Gm3375-201ENSMUST00000203929 796 ntBASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf11aO35305 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Timm23-208ENSMUST00000226683 750 ntBASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf11aO35305 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf11aO35305 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms