Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.45■□□□□ 0.06
Sh2b3O09039 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.45■□□□□ 0.06
Sh2b3O09039 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.45■□□□□ 0.06
Sh2b3O09039 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.45■□□□□ 0.06
Sh2b3O09039 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Sh2b3O09039 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.45■□□□□ 0.06
Sh2b3O09039 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.45■□□□□ 0.06
Sh2b3O09039 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2b3O09039 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.44■□□□□ 0.06
Sh2b3O09039 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Sh2b3O09039 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Gm10231-201ENSMUST00000181584 441 ntBASIC15.44■□□□□ 0.06
Sh2b3O09039 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.44■□□□□ 0.06
Sh2b3O09039 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.44■□□□□ 0.06
Sh2b3O09039 Gm10175-202ENSMUST00000208752 441 ntBASIC15.44■□□□□ 0.06
Sh2b3O09039 Timm23-208ENSMUST00000226683 750 ntBASIC15.44■□□□□ 0.06
Sh2b3O09039 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Sh2b3O09039 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Sh2b3O09039 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Sh2b3O09039 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.44■□□□□ 0.06
Sh2b3O09039 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2b3O09039 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Sh2b3O09039 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Sh2b3O09039 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2b3O09039 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.43■□□□□ 0.06
Sh2b3O09039 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Sh2b3O09039 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Sh2b3O09039 Odf3b-204ENSMUST00000227834 930 ntBASIC15.43■□□□□ 0.06
Sh2b3O09039 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2b3O09039 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2b3O09039 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2b3O09039 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2b3O09039 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2b3O09039 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2b3O09039 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.43■□□□□ 0.06
Sh2b3O09039 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2b3O09039 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2b3O09039 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2b3O09039 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2b3O09039 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sh2b3O09039 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2b3O09039 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2b3O09039 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Sh2b3O09039 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.42■□□□□ 0.06
Sh2b3O09039 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2b3O09039 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Sh2b3O09039 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.42■□□□□ 0.06
Sh2b3O09039 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2b3O09039 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2b3O09039 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2b3O09039 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2b3O09039 Idnk-204ENSMUST00000226010 1898 ntBASIC15.42■□□□□ 0.06
Sh2b3O09039 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2b3O09039 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Sh2b3O09039 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Sh2b3O09039 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.41■□□□□ 0.06
Sh2b3O09039 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.41■□□□□ 0.06
Sh2b3O09039 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.41■□□□□ 0.06
Sh2b3O09039 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2b3O09039 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh2b3O09039 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sh2b3O09039 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh2b3O09039 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh2b3O09039 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms