Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
B020004C17RikJ3QP07 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
B020004C17RikJ3QP07 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.43■□□□□ 0.7
B020004C17RikJ3QP07 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
B020004C17RikJ3QP07 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
B020004C17RikJ3QP07 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
B020004C17RikJ3QP07 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
B020004C17RikJ3QP07 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
B020004C17RikJ3QP07 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.41■□□□□ 0.7
B020004C17RikJ3QP07 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
B020004C17RikJ3QP07 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
B020004C17RikJ3QP07 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
B020004C17RikJ3QP07 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
B020004C17RikJ3QP07 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
B020004C17RikJ3QP07 Gm11336-201ENSMUST00000118168 334 ntBASIC19.41■□□□□ 0.7
B020004C17RikJ3QP07 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.41■□□□□ 0.7
B020004C17RikJ3QP07 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.41■□□□□ 0.7
B020004C17RikJ3QP07 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
B020004C17RikJ3QP07 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
B020004C17RikJ3QP07 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Gm12895-201ENSMUST00000122214 226 ntBASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Gm43514-201ENSMUST00000198852 424 ntBASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
B020004C17RikJ3QP07 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.39■□□□□ 0.7
B020004C17RikJ3QP07 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
B020004C17RikJ3QP07 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
B020004C17RikJ3QP07 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
B020004C17RikJ3QP07 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.39■□□□□ 0.69
B020004C17RikJ3QP07 Gm6443-201ENSMUST00000203599 874 ntBASIC19.39■□□□□ 0.69
B020004C17RikJ3QP07 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.39■□□□□ 0.69
B020004C17RikJ3QP07 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
B020004C17RikJ3QP07 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
B020004C17RikJ3QP07 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
B020004C17RikJ3QP07 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
B020004C17RikJ3QP07 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
B020004C17RikJ3QP07 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
B020004C17RikJ3QP07 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
B020004C17RikJ3QP07 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
B020004C17RikJ3QP07 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
B020004C17RikJ3QP07 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
B020004C17RikJ3QP07 Fst-202ENSMUST00000223640 2612 ntBASIC19.38■□□□□ 0.69
B020004C17RikJ3QP07 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
B020004C17RikJ3QP07 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
B020004C17RikJ3QP07 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
B020004C17RikJ3QP07 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
B020004C17RikJ3QP07 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
B020004C17RikJ3QP07 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Gm13186-201ENSMUST00000118031 316 ntBASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Gm27000-201ENSMUST00000182943 842 ntBASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
B020004C17RikJ3QP07 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
B020004C17RikJ3QP07 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
B020004C17RikJ3QP07 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
B020004C17RikJ3QP07 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.36■□□□□ 0.69
B020004C17RikJ3QP07 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
B020004C17RikJ3QP07 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
B020004C17RikJ3QP07 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
B020004C17RikJ3QP07 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms