Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Gm27000-201ENSMUST00000182943 842 ntBASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 AC122351.1-201ENSMUST00000220467 126 ntBASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ccdc180J3QNE4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Ccdc180J3QNE4 AC153889.1-201ENSMUST00000219257 330 ntBASIC31.66■■■□□ 2.66
Ccdc180J3QNE4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Ccdc180J3QNE4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Ccdc180J3QNE4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC31.65■■■□□ 2.66
Ccdc180J3QNE4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ccdc180J3QNE4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Ccdc180J3QNE4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC31.65■■■□□ 2.66
Ccdc180J3QNE4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
Ccdc180J3QNE4 Gm44771-201ENSMUST00000206975 626 ntBASIC31.64■■■□□ 2.66
Ccdc180J3QNE4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ccdc180J3QNE4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ccdc180J3QNE4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ccdc180J3QNE4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Ccdc180J3QNE4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC31.64■■■□□ 2.66
Ccdc180J3QNE4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.65
Ccdc180J3QNE4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC31.64■■■□□ 2.65
Ccdc180J3QNE4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ccdc180J3QNE4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Ccdc180J3QNE4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ccdc180J3QNE4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Ccdc180J3QNE4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC31.63■■■□□ 2.65
Ccdc180J3QNE4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC31.62■■■□□ 2.65
Ccdc180J3QNE4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
Ccdc180J3QNE4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Ccdc180J3QNE4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Ccdc180J3QNE4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ccdc180J3QNE4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC31.61■■■□□ 2.65
Ccdc180J3QNE4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ccdc180J3QNE4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
Ccdc180J3QNE4 Gm6623-201ENSMUST00000173570 544 ntBASIC31.61■■■□□ 2.65
Ccdc180J3QNE4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ccdc180J3QNE4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ccdc180J3QNE4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Ccdc180J3QNE4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
Ccdc180J3QNE4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ccdc180J3QNE4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ccdc180J3QNE4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
Ccdc180J3QNE4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
Ccdc180J3QNE4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC31.6■■■□□ 2.65
Ccdc180J3QNE4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC31.6■■■□□ 2.65
Ccdc180J3QNE4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ccdc180J3QNE4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ccdc180J3QNE4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ccdc180J3QNE4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Ccdc180J3QNE4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Ccdc180J3QNE4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Ccdc180J3QNE4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Ccdc180J3QNE4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Ccdc180J3QNE4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ccdc180J3QNE4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC31.58■■■□□ 2.65
Ccdc180J3QNE4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC31.58■■■□□ 2.65
Ccdc180J3QNE4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ccdc180J3QNE4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ccdc180J3QNE4 Gm5953-201ENSMUST00000220644 2616 ntBASIC31.58■■■□□ 2.65
Ccdc180J3QNE4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC31.57■■■□□ 2.65
Ccdc180J3QNE4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC31.57■■■□□ 2.65
Ccdc180J3QNE4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
Ccdc180J3QNE4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC31.57■■■□□ 2.65
Ccdc180J3QNE4 AC133598.3-202ENSMUST00000224219 531 ntBASIC31.57■■■□□ 2.65
Ccdc180J3QNE4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ccdc180J3QNE4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC31.57■■■□□ 2.64
Ccdc180J3QNE4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Ccdc180J3QNE4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ccdc180J3QNE4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC31.57■■■□□ 2.64
Ccdc180J3QNE4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC31.57■■■□□ 2.64
Ccdc180J3QNE4 Gm27459-201ENSMUST00000184860 107 ntBASIC31.57■■■□□ 2.64
Ccdc180J3QNE4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ccdc180J3QNE4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc180J3QNE4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
Ccdc180J3QNE4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Ccdc180J3QNE4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC31.55■■■□□ 2.64
Ccdc180J3QNE4 AC124569.2-201ENSMUST00000225998 818 ntBASIC31.55■■■□□ 2.64
Ccdc180J3QNE4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ccdc180J3QNE4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms