Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Colca2F8VPY8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.5■□□□□ 0.23
Colca2F8VPY8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Colca2F8VPY8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Colca2F8VPY8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.5■□□□□ 0.23
Colca2F8VPY8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Colca2F8VPY8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.5■□□□□ 0.23
Colca2F8VPY8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Colca2F8VPY8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Colca2F8VPY8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Colca2F8VPY8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.5■□□□□ 0.23
Colca2F8VPY8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.5■□□□□ 0.23
Colca2F8VPY8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.5■□□□□ 0.23
Colca2F8VPY8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Colca2F8VPY8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Colca2F8VPY8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Colca2F8VPY8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.49■□□□□ 0.23
Colca2F8VPY8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Colca2F8VPY8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Colca2F8VPY8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Colca2F8VPY8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.49■□□□□ 0.23
Colca2F8VPY8 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.49■□□□□ 0.23
Colca2F8VPY8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.49■□□□□ 0.23
Colca2F8VPY8 Idnk-204ENSMUST00000226010 1898 ntBASIC16.49■□□□□ 0.23
Colca2F8VPY8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Colca2F8VPY8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Colca2F8VPY8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Colca2F8VPY8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.48■□□□□ 0.23
Colca2F8VPY8 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.48■□□□□ 0.23
Colca2F8VPY8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Rps4l-201ENSMUST00000071745 943 ntBASIC16.48■□□□□ 0.23
Colca2F8VPY8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Colca2F8VPY8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.47■□□□□ 0.23
Colca2F8VPY8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Colca2F8VPY8 Gm13186-201ENSMUST00000118031 316 ntBASIC16.47■□□□□ 0.23
Colca2F8VPY8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Colca2F8VPY8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Colca2F8VPY8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.47■□□□□ 0.23
Colca2F8VPY8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.47■□□□□ 0.23
Colca2F8VPY8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Colca2F8VPY8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Colca2F8VPY8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Colca2F8VPY8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Colca2F8VPY8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Colca2F8VPY8 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.47■□□□□ 0.23
Colca2F8VPY8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Colca2F8VPY8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Colca2F8VPY8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.46■□□□□ 0.23
Colca2F8VPY8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.46■□□□□ 0.23
Colca2F8VPY8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Colca2F8VPY8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Colca2F8VPY8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Golph3-205ENSMUST00000228671 2842 ntBASIC16.45■□□□□ 0.22
Colca2F8VPY8 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.45■□□□□ 0.22
Colca2F8VPY8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Gm27000-201ENSMUST00000182943 842 ntBASIC16.45■□□□□ 0.22
Colca2F8VPY8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Gm2651-201ENSMUST00000203560 838 ntBASIC16.45■□□□□ 0.22
Colca2F8VPY8 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.45■□□□□ 0.22
Colca2F8VPY8 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.45■□□□□ 0.22
Colca2F8VPY8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.45■□□□□ 0.22
Colca2F8VPY8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Colca2F8VPY8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Colca2F8VPY8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Colca2F8VPY8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Colca2F8VPY8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms