Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt28A6BLY7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt28A6BLY7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt28A6BLY7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt28A6BLY7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.24■□□□□ 0.67
Krt28A6BLY7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Krt28A6BLY7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt28A6BLY7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt28A6BLY7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Krt28A6BLY7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.24■□□□□ 0.67
Krt28A6BLY7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt28A6BLY7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt28A6BLY7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.23■□□□□ 0.67
Krt28A6BLY7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt28A6BLY7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.22■□□□□ 0.67
Krt28A6BLY7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt28A6BLY7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.22■□□□□ 0.67
Krt28A6BLY7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt28A6BLY7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt28A6BLY7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt28A6BLY7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Krt28A6BLY7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt28A6BLY7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt28A6BLY7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Krt28A6BLY7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Krt28A6BLY7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt28A6BLY7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.2■□□□□ 0.66
Krt28A6BLY7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.2■□□□□ 0.66
Krt28A6BLY7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Krt28A6BLY7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt28A6BLY7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Gm15372-201ENSMUST00000120729 834 ntBASIC19.18■□□□□ 0.66
Krt28A6BLY7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms