Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Mir770-201ENSMUST00000103252 94 ntBASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Gm17808-201ENSMUST00000200859 894 ntBASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3aA2ASI5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3aA2ASI5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3aA2ASI5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3aA2ASI5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scn3aA2ASI5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3aA2ASI5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3aA2ASI5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.41■□□□□ 0.7
Scn3aA2ASI5 Gm27000-201ENSMUST00000182943 842 ntBASIC19.41■□□□□ 0.7
Scn3aA2ASI5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3aA2ASI5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3aA2ASI5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3aA2ASI5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn3aA2ASI5 Gm9103-201ENSMUST00000119371 405 ntBASIC19.39■□□□□ 0.7
Scn3aA2ASI5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn3aA2ASI5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.39■□□□□ 0.7
Scn3aA2ASI5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.39■□□□□ 0.7
Scn3aA2ASI5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn3aA2ASI5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn3aA2ASI5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn3aA2ASI5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Scn3aA2ASI5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn3aA2ASI5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn3aA2ASI5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn3aA2ASI5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Gm14859-201ENSMUST00000117752 357 ntBASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Gm11950-201ENSMUST00000121615 838 ntBASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3aA2ASI5 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Gm26039-201ENSMUST00000158152 144 ntBASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Gm17971-201ENSMUST00000190239 806 ntBASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn3aA2ASI5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn3aA2ASI5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Scn3aA2ASI5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn3aA2ASI5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.36■□□□□ 0.69
Scn3aA2ASI5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.36■□□□□ 0.69
Scn3aA2ASI5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn3aA2ASI5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn3aA2ASI5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn3aA2ASI5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn3aA2ASI5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn3aA2ASI5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms