Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Scn1aA2APX8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn1aA2APX8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn1aA2APX8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn1aA2APX8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn1aA2APX8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.23■□□□□ 0.51
Scn1aA2APX8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Scn1aA2APX8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.23■□□□□ 0.51
Scn1aA2APX8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Scn1aA2APX8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn1aA2APX8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn1aA2APX8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn1aA2APX8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn1aA2APX8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn1aA2APX8 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.21■□□□□ 0.51
Scn1aA2APX8 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.21■□□□□ 0.51
Scn1aA2APX8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Scn1aA2APX8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scn1aA2APX8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn1aA2APX8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn1aA2APX8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Scn1aA2APX8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn1aA2APX8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Scn1aA2APX8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Scn1aA2APX8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.2■□□□□ 0.5
Scn1aA2APX8 Gm10566-201ENSMUST00000086739 996 ntBASIC18.2■□□□□ 0.5
Scn1aA2APX8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Mir1668-201ENSMUST00000184114 107 ntBASIC18.2■□□□□ 0.5
Scn1aA2APX8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn1aA2APX8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn1aA2APX8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn1aA2APX8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn1aA2APX8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn1aA2APX8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn1aA2APX8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn1aA2APX8 Gm18101-201ENSMUST00000215769 548 ntBASIC18.19■□□□□ 0.5
Scn1aA2APX8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn1aA2APX8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Scn1aA2APX8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn1aA2APX8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn1aA2APX8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn1aA2APX8 Gm23634-201ENSMUST00000175071 91 ntBASIC18.18■□□□□ 0.5
Scn1aA2APX8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn1aA2APX8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn1aA2APX8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Scn1aA2APX8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn1aA2APX8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn1aA2APX8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn1aA2APX8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn1aA2APX8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn1aA2APX8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn1aA2APX8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn1aA2APX8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn1aA2APX8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn1aA2APX8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn1aA2APX8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Scn1aA2APX8 Gm8969-201ENSMUST00000199694 526 ntBASIC18.17■□□□□ 0.5
Scn1aA2APX8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn1aA2APX8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.17■□□□□ 0.5
Scn1aA2APX8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.17■□□□□ 0.5
Scn1aA2APX8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Scn1aA2APX8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn1aA2APX8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn1aA2APX8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn1aA2APX8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Scn1aA2APX8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn1aA2APX8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms