Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gm21814-202ENSMUST00000203277 873 ntBASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atg4a-psA0A0G2JFS9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gm3375-201ENSMUST00000203929 796 ntBASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Timm23-208ENSMUST00000226683 750 ntBASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.09■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atg4a-psA0A0G2JFS9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.08■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Gm17661-201ENSMUST00000170317 270 ntBASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Odf3b-204ENSMUST00000227834 930 ntBASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Gm7638-201ENSMUST00000121348 967 ntBASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atg4a-psA0A0G2JFS9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Atg4a-psA0A0G2JFS9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms