Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28557A0A087WQQ0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28557A0A087WQQ0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28557A0A087WQQ0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Gm2399-201ENSMUST00000104944 225 ntBASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Gm13401-201ENSMUST00000117074 291 ntBASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Gm13216-201ENSMUST00000117145 591 ntBASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Gm18671-201ENSMUST00000214826 683 ntBASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Gm6365-201ENSMUST00000054711 744 ntBASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Zfp783-201ENSMUST00000095946 670 ntBASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28557A0A087WQQ0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28557A0A087WQQ0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm28557A0A087WQQ0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm28557A0A087WQQ0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms