Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav14n-3A0A075B645 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav14n-3A0A075B645 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav14n-3A0A075B645 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav14n-3A0A075B645 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Trav14n-3A0A075B645 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav14n-3A0A075B645 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav14n-3A0A075B645 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav14n-3A0A075B645 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav14n-3A0A075B645 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav14n-3A0A075B645 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Trav14n-3A0A075B645 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav14n-3A0A075B645 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav14n-3A0A075B645 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav14n-3A0A075B645 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav14n-3A0A075B645 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms