Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Mir2861-201ENSMUST00000175539 82 ntBASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm10033-202ENSMUST00000211874 928 ntBASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-1A0A075B5Z8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-1A0A075B5Z8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-1A0A075B5Z8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-1A0A075B5Z8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-1A0A075B5Z8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-1A0A075B5Z8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-1A0A075B5Z8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Trav6-1A0A075B5Z8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-1A0A075B5Z8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-1A0A075B5Z8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm13401-201ENSMUST00000117074 291 ntBASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm18671-201ENSMUST00000214826 683 ntBASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.94□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Flg-201ENSMUST00000050758 1488 ntBASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms