Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.67□□□□□ -1.82
H2afb1S4R1E0 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
H2afb1S4R1E0 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
H2afb1S4R1E0 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
H2afb1S4R1E0 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm12173-201ENSMUST00000117622 273 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm15382-201ENSMUST00000118011 537 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm15916-201ENSMUST00000118355 736 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm13678-201ENSMUST00000118926 340 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm9001-201ENSMUST00000121642 399 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm4912-201ENSMUST00000122212 1044 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm12885-201ENSMUST00000122246 328 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm11281-201ENSMUST00000141391 576 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm22143-201ENSMUST00000157401 203 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm23773-201ENSMUST00000158985 296 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm16589-201ENSMUST00000159522 918 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm26365-201ENSMUST00000179177 94 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Mir7056-201ENSMUST00000183776 59 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm27690-201ENSMUST00000184596 126 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm27564-201ENSMUST00000185196 96 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm7897-201ENSMUST00000193981 554 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm42502-201ENSMUST00000198550 1089 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm43004-201ENSMUST00000201872 703 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm18791-201ENSMUST00000204611 726 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm45636-201ENSMUST00000210497 1064 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 AC121114.1-201ENSMUST00000228522 570 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb1S4R1E0 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.65□□□□□ -1.82
H2afb1S4R1E0 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.65□□□□□ -1.82
H2afb1S4R1E0 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.65□□□□□ -1.82
H2afb1S4R1E0 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
H2afb1S4R1E0 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.65□□□□□ -1.82
H2afb1S4R1E0 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
H2afb1S4R1E0 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
H2afb1S4R1E0 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
H2afb1S4R1E0 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
H2afb1S4R1E0 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
H2afb1S4R1E0 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm11898-201ENSMUST00000117161 385 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm12982-201ENSMUST00000117408 190 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm5379-201ENSMUST00000120973 826 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm26424-201ENSMUST00000122530 104 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm22478-201ENSMUST00000122570 154 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.65□□□□□ -1.83
H2afb1S4R1E0 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm22036-201ENSMUST00000157279 215 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm23231-201ENSMUST00000157299 104 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm24930-201ENSMUST00000158315 83 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm24768-201ENSMUST00000158512 94 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm3851-201ENSMUST00000168653 318 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm28997-201ENSMUST00000188759 429 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm9632-201ENSMUST00000195934 643 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm43104-201ENSMUST00000197234 311 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Gm44032-201ENSMUST00000204841 166 ntBASIC3.65□□□□□ -1.83
H2afb1S4R1E0 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms