Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm29011-201ENSMUST00000191059 712 ntBASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Gm18747-201ENSMUST00000198129 648 ntBASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Gm2710-201ENSMUST00000073196 603 ntBASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.72□□□□□ -1.81
Smarcb1Q9Z0H3 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Smarcb1Q9Z0H3 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm24142-201ENSMUST00000101960 107 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm9078-201ENSMUST00000119126 617 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm14119-201ENSMUST00000119511 235 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm11350-201ENSMUST00000121436 870 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm22988-201ENSMUST00000122759 144 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm4725-201ENSMUST00000151048 587 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm25519-201ENSMUST00000158392 127 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm27718-201ENSMUST00000183721 86 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Mir6715-201ENSMUST00000184990 57 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm42625-201ENSMUST00000198611 922 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm20177-201ENSMUST00000203705 334 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm4057-201ENSMUST00000221407 368 ntBASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Smarcb1Q9Z0H3 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm24935-201ENSMUST00000103770 110 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm6079-201ENSMUST00000121356 404 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm14559-201ENSMUST00000121745 496 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm15946-201ENSMUST00000160654 423 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm27864-201ENSMUST00000183704 190 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm5829-201ENSMUST00000191383 351 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm43765-201ENSMUST00000196303 893 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm42621-201ENSMUST00000198114 275 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm44824-201ENSMUST00000207021 229 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm44849-201ENSMUST00000207595 484 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm18193-201ENSMUST00000210017 772 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm18903-201ENSMUST00000215343 480 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 BC023105-201ENSMUST00000073997 1227 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm24950-201ENSMUST00000082768 191 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm23971-201ENSMUST00000083317 191 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm23849-201ENSMUST00000083833 191 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm26316-201ENSMUST00000083886 191 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.7□□□□□ -1.82
Smarcb1Q9Z0H3 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.69□□□□□ -1.82
Smarcb1Q9Z0H3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Smarcb1Q9Z0H3 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Smarcb1Q9Z0H3 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms