Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm43888-201ENSMUST00000204405 2587 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm38073-201ENSMUST00000195141 3665 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Snord88a-201ENSMUST00000116723 90 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm22710-201ENSMUST00000116892 125 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm11976-201ENSMUST00000119236 295 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm6987-201ENSMUST00000119319 428 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm15311-201ENSMUST00000119682 282 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm15305-201ENSMUST00000120354 288 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm6446-201ENSMUST00000120604 818 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm5166-201ENSMUST00000121332 573 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm22276-201ENSMUST00000122469 129 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm25392-201ENSMUST00000157335 297 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm26097-201ENSMUST00000179642 93 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm6003-201ENSMUST00000187903 463 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm2979-201ENSMUST00000193442 463 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm43250-201ENSMUST00000196536 273 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm45013-201ENSMUST00000206883 178 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm17849-201ENSMUST00000219788 853 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 AC154576.1-201ENSMUST00000225864 563 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh5Q9QUM7 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm12285-201ENSMUST00000117347 233 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm14880-201ENSMUST00000117581 292 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm13983-201ENSMUST00000118018 865 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm14581-201ENSMUST00000121726 198 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm23463-201ENSMUST00000122468 99 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm23000-201ENSMUST00000157083 139 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm7335-201ENSMUST00000172475 373 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Mir6348-201ENSMUST00000183804 120 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm19901-201ENSMUST00000192191 495 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm43436-201ENSMUST00000199308 147 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm19126-201ENSMUST00000207896 509 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh5Q9QUM7 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm17976-201ENSMUST00000184037 1909 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms