Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm12137-201ENSMUST00000119565 346 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm13220-201ENSMUST00000121535 508 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm12591-201ENSMUST00000122407 1177 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm25342-201ENSMUST00000157459 122 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm25341-201ENSMUST00000157461 268 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm25383-201ENSMUST00000157810 144 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm23546-201ENSMUST00000158211 137 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm22521-201ENSMUST00000158272 134 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm22135-201ENSMUST00000158752 108 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Ighv1-27-201ENSMUST00000194473 340 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm44300-201ENSMUST00000196792 121 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm42474-201ENSMUST00000201073 505 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm19253-201ENSMUST00000204279 307 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm46194-201ENSMUST00000218136 320 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm6841-201ENSMUST00000220602 598 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trem1Q9JKE2 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.42□□□□□ -1.86
Trem1Q9JKE2 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Mir291a-201ENSMUST00000104815 82 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm14518-201ENSMUST00000117351 542 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm13478-201ENSMUST00000118312 413 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm11708-201ENSMUST00000119530 832 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm14687-201ENSMUST00000120206 363 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm16363-201ENSMUST00000132460 877 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm23587-201ENSMUST00000157658 84 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm3077-201ENSMUST00000165903 627 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 V1rg10-201ENSMUST00000183378 937 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm27163-201ENSMUST00000184767 409 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm18727-201ENSMUST00000185981 553 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm38061-201ENSMUST00000192490 365 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm8599-201ENSMUST00000193033 457 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm9238-201ENSMUST00000196181 329 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Mir6994-201ENSMUST00000198985 73 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 AC109180.1-201ENSMUST00000218676 398 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Mir30b-201ENSMUST00000083542 96 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm7381-201ENSMUST00000098958 300 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.41□□□□□ -1.86
Trem1Q9JKE2 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.41□□□□□ -1.86
Trem1Q9JKE2 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.4□□□□□ -1.86
Trem1Q9JKE2 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.86
Trem1Q9JKE2 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.4□□□□□ -1.86
Trem1Q9JKE2 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Trem1Q9JKE2 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.4□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms