Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm17711-201ENSMUST00000172028 237 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm27903-201ENSMUST00000175482 126 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm28141-201ENSMUST00000186676 342 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm19280-201ENSMUST00000190191 205 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm37698-201ENSMUST00000192605 463 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm20074-201ENSMUST00000208144 484 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm45608-201ENSMUST00000210948 389 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm45379-201ENSMUST00000211772 549 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm36247-201ENSMUST00000211834 285 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm30674-201ENSMUST00000214523 392 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm8785-201ENSMUST00000220259 487 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm10212-201ENSMUST00000087884 324 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm7363-201ENSMUST00000119883 399 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm7855-201ENSMUST00000137737 687 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm22226-201ENSMUST00000157355 109 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm22501-201ENSMUST00000158981 127 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm18486-201ENSMUST00000184040 298 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Trbv28-201ENSMUST00000192804 264 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm37239-201ENSMUST00000193510 141 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm9379-201ENSMUST00000196790 646 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm19243-201ENSMUST00000198592 269 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm18429-201ENSMUST00000198707 421 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm6064-201ENSMUST00000203999 454 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.41□□□□□ -1.86
Lima1Q9ERG0 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.41□□□□□ -1.86
Lima1Q9ERG0 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Lima1Q9ERG0 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm24096-201ENSMUST00000103905 110 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm12448-201ENSMUST00000118852 655 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm12543-201ENSMUST00000120410 543 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm12880-201ENSMUST00000120652 494 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm23441-201ENSMUST00000157268 127 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm22789-201ENSMUST00000157884 130 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm9613-201ENSMUST00000171662 196 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28010-201ENSMUST00000179485 126 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Mir6238-201ENSMUST00000184140 129 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm18445-201ENSMUST00000195502 774 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms