Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Gm24550-201ENSMUST00000158648 279 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Gm24976-201ENSMUST00000158972 135 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Gm19418-201ENSMUST00000197436 580 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Gm23925-201ENSMUST00000082471 132 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Olfr713-201ENSMUST00000098139 975 ntBASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Cdc40Q9DC48 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
Cdc40Q9DC48 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm15613-201ENSMUST00000118396 326 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm5943-201ENSMUST00000119458 459 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm22320-201ENSMUST00000157149 312 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm22531-201ENSMUST00000158819 140 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm26460-201ENSMUST00000175061 126 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm22108-201ENSMUST00000177961 106 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm24798-201ENSMUST00000179334 106 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm27392-201ENSMUST00000185041 101 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm29105-201ENSMUST00000187256 450 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm43765-201ENSMUST00000196303 893 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 AC139294.2-201ENSMUST00000227159 285 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm5185-201ENSMUST00000080271 619 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdc40Q9DC48 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm24666-201ENSMUST00000158937 167 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm29525-201ENSMUST00000189844 699 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm7041-201ENSMUST00000201227 524 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm43155-201ENSMUST00000202661 494 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm6064-201ENSMUST00000203999 454 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm45034-201ENSMUST00000206831 482 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm44887-201ENSMUST00000208980 178 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm18116-201ENSMUST00000220920 537 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm8231-201ENSMUST00000221617 783 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm24626-201ENSMUST00000082621 161 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 139.2 ms