Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm45247-201ENSMUST00000210757 309 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm18043-201ENSMUST00000216741 739 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm23925-201ENSMUST00000082471 132 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm25480-201ENSMUST00000083217 133 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.34□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Ccdc39Q9D5Y1 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Ccdc39Q9D5Y1 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm11869-201ENSMUST00000118701 329 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm14975-201ENSMUST00000118741 664 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm15026-201ENSMUST00000119219 458 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm15014-201ENSMUST00000120742 258 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm11233-201ENSMUST00000122357 634 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm24553-201ENSMUST00000158653 131 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Mir6238-201ENSMUST00000184140 129 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28574-201ENSMUST00000185757 699 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28781-201ENSMUST00000185760 696 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28339-201ENSMUST00000185845 696 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29062-201ENSMUST00000186032 694 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29574-201ENSMUST00000186226 696 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28828-201ENSMUST00000186601 696 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28057-201ENSMUST00000186603 615 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28255-201ENSMUST00000187101 694 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29307-201ENSMUST00000187367 696 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28397-201ENSMUST00000187970 699 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28896-201ENSMUST00000188609 696 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29545-201ENSMUST00000188878 694 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29339-201ENSMUST00000189613 696 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28745-201ENSMUST00000190069 305 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28159-201ENSMUST00000190296 696 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29366-201ENSMUST00000190481 699 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29407-201ENSMUST00000191468 696 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm37433-201ENSMUST00000192695 678 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm6680-201ENSMUST00000192789 950 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm37441-201ENSMUST00000194430 678 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm38107-201ENSMUST00000194873 696 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm45245-201ENSMUST00000210082 376 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 AC132104.1-201ENSMUST00000213615 260 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 AC154184.2-201ENSMUST00000225335 349 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc39Q9D5Y1 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm23697-201ENSMUST00000103897 110 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm14050-201ENSMUST00000117052 346 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm15799-201ENSMUST00000120899 289 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm14383-201ENSMUST00000121637 386 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm13419-201ENSMUST00000121711 271 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm12693-201ENSMUST00000121965 483 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm8224-201ENSMUST00000166178 497 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Mir6408-201ENSMUST00000183643 91 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28011-201ENSMUST00000184097 175 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm28655-201ENSMUST00000191538 692 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm37698-201ENSMUST00000192605 463 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm18672-201ENSMUST00000208035 270 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm3565-201ENSMUST00000222670 609 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms