Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm14142-201ENSMUST00000117833 296 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm14591-201ENSMUST00000120407 518 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm12885-201ENSMUST00000122246 328 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm14903-201ENSMUST00000122435 537 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm25572-201ENSMUST00000157527 172 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm7241-201ENSMUST00000159853 357 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm27538-201ENSMUST00000185065 294 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Trdv3-201ENSMUST00000198551 309 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm44857-201ENSMUST00000208331 196 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm7786-201ENSMUST00000210494 436 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 AC160970.1-201ENSMUST00000219311 475 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm22019-201ENSMUST00000104359 96 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm12458-201ENSMUST00000119387 495 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm11281-201ENSMUST00000141391 576 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm23753-201ENSMUST00000157575 149 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Adgrg4-206ENSMUST00000168724 531 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm22120-201ENSMUST00000175590 70 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm28396-201ENSMUST00000190309 379 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm17829-201ENSMUST00000219782 344 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 AC154828.2-201ENSMUST00000220908 1070 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.3□□□□□ -1.72
Smc1aQ9CU62 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Smc1aQ9CU62 AC154681.1-201ENSMUST00000225876 1735 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm14577-201ENSMUST00000121134 256 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm12313-201ENSMUST00000121347 421 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm22208-201ENSMUST00000122658 110 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm10067-201ENSMUST00000179462 348 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm28788-201ENSMUST00000189717 375 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm29558-201ENSMUST00000190134 375 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm7897-201ENSMUST00000193981 554 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm18429-201ENSMUST00000198707 421 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm34779-201ENSMUST00000210036 263 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms