Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Use1Q9CQ56 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm43704-201ENSMUST00000196164 496 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm5552-201ENSMUST00000197149 515 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm18194-201ENSMUST00000210455 481 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm5175-202ENSMUST00000219699 529 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
Use1Q9CQ56 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm26121-201ENSMUST00000083364 162 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm10212-201ENSMUST00000087884 324 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Use1Q9CQ56 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Use1Q9CQ56 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm23481-201ENSMUST00000104173 131 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm13228-201ENSMUST00000118937 634 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm12900-201ENSMUST00000120919 573 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm15244-201ENSMUST00000121122 130 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm4852-201ENSMUST00000121202 729 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm23782-201ENSMUST00000157939 120 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm23824-201ENSMUST00000158741 276 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm16147-201ENSMUST00000162143 373 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.49□□□□□ -1.85
Use1Q9CQ56 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm5829-201ENSMUST00000191383 351 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Trbv28-201ENSMUST00000192804 264 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm38356-201ENSMUST00000194313 408 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm44665-201ENSMUST00000205381 251 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.49□□□□□ -1.85
Use1Q9CQ56 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Use1Q9CQ56 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm14299-201ENSMUST00000117586 397 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm13650-201ENSMUST00000117729 433 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm14282-201ENSMUST00000119484 240 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm11600-201ENSMUST00000119592 240 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm20693-201ENSMUST00000177431 211 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm27155-201ENSMUST00000183716 898 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Mir6345-201ENSMUST00000184286 128 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm27445-201ENSMUST00000184484 72 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm44865-201ENSMUST00000207240 531 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm18507-201ENSMUST00000218855 525 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm5548-201ENSMUST00000055878 397 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Use1Q9CQ56 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Gm42968-201ENSMUST00000198578 1372 ntBASIC3.48□□□□□ -1.85
Use1Q9CQ56 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Mir551b-201ENSMUST00000102165 98 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm12568-201ENSMUST00000117362 624 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm3835-201ENSMUST00000120752 403 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm14903-201ENSMUST00000122435 537 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Mir1264-201ENSMUST00000175381 86 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Mir1251-201ENSMUST00000175486 84 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm21809-201ENSMUST00000178495 468 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm17412-201ENSMUST00000179261 468 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms