Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm22656-201ENSMUST00000104199 171 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm11313-201ENSMUST00000118779 432 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm22345-201ENSMUST00000122644 107 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm22597-201ENSMUST00000157602 80 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm23124-201ENSMUST00000157650 107 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm26468-201ENSMUST00000158644 106 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Mir3112-201ENSMUST00000175431 82 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm25397-201ENSMUST00000176951 92 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm27013-201ENSMUST00000182441 1024 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm28390-201ENSMUST00000185212 700 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm28785-201ENSMUST00000187478 379 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Clrn1Q8K445 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Clrn1Q8K445 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Clrn1Q8K445 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.66□□□□□ -1.66
Clrn1Q8K445 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Clrn1Q8K445 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.65□□□□□ -1.66
Clrn1Q8K445 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Clrn1Q8K445 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.65□□□□□ -1.66
Clrn1Q8K445 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.65□□□□□ -1.66
Clrn1Q8K445 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.65□□□□□ -1.66
Clrn1Q8K445 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.65□□□□□ -1.66
Clrn1Q8K445 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Clrn1Q8K445 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.65□□□□□ -1.66
Clrn1Q8K445 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Clrn1Q8K445 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.65□□□□□ -1.66
Clrn1Q8K445 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm14385-201ENSMUST00000116315 876 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm22194-201ENSMUST00000116869 95 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm14175-201ENSMUST00000119835 241 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm14977-201ENSMUST00000121626 812 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm24371-201ENSMUST00000122662 267 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm25555-201ENSMUST00000158078 111 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm26354-201ENSMUST00000158221 129 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm25520-201ENSMUST00000158389 118 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm15838-201ENSMUST00000161575 180 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm23144-201ENSMUST00000180226 107 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm18828-202ENSMUST00000181035 310 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm27543-201ENSMUST00000183562 177 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Mir6416-201ENSMUST00000183664 117 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm27492-201ENSMUST00000185194 187 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm28283-201ENSMUST00000185509 178 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm29475-201ENSMUST00000190767 312 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm38019-201ENSMUST00000195133 380 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm43724-201ENSMUST00000197516 226 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm43968-201ENSMUST00000203388 389 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm7825-201ENSMUST00000204046 416 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm45312-201ENSMUST00000210566 311 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.65□□□□□ -1.67
Clrn1Q8K445 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm18696-201ENSMUST00000220103 274 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Gm9512-201ENSMUST00000223112 497 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 AC154390.1-201ENSMUST00000225629 277 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Clrn1Q8K445 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.65□□□□□ -1.67
Clrn1Q8K445 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Clrn1Q8K445 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Clrn1Q8K445 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms