Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm6429-201ENSMUST00000117144 475 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm14293-201ENSMUST00000118528 577 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm12311-201ENSMUST00000118803 374 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm8200-201ENSMUST00000122390 222 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm13602-201ENSMUST00000122405 493 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm10444-201ENSMUST00000126708 148 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm24910-201ENSMUST00000157289 272 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm16566-201ENSMUST00000160387 910 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm18354-201ENSMUST00000173515 1068 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm25019-201ENSMUST00000179732 110 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm25412-201ENSMUST00000180258 107 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm6075-201ENSMUST00000186816 486 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm29600-201ENSMUST00000188687 377 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm29038-201ENSMUST00000191543 678 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm42830-201ENSMUST00000196642 313 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm5983-201ENSMUST00000197739 770 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm18160-201ENSMUST00000214279 827 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm23464-201ENSMUST00000083145 147 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
Brf1Q8CFK2 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm26367-201ENSMUST00000104165 132 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm24469-201ENSMUST00000104487 131 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm5379-201ENSMUST00000120973 826 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm25150-201ENSMUST00000157121 60 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm22968-201ENSMUST00000157955 118 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm22312-201ENSMUST00000158005 130 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm24939-201ENSMUST00000158325 137 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm9593-201ENSMUST00000166034 469 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm8807-201ENSMUST00000179328 492 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm29545-201ENSMUST00000188878 694 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Trbv22-201ENSMUST00000191697 291 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm42465-201ENSMUST00000197036 492 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm18100-201ENSMUST00000200897 452 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm45192-201ENSMUST00000206749 283 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm17991-201ENSMUST00000208139 297 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 AC153924.1-201ENSMUST00000220117 312 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.21□□□□□ -1.58
Brf1Q8CFK2 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 125.9 ms