Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm12335-201ENSMUST00000119738 327 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm12543-201ENSMUST00000120410 543 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm16005-201ENSMUST00000120515 269 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm13508-201ENSMUST00000121639 775 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm23602-201ENSMUST00000157258 132 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm25413-201ENSMUST00000158544 312 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm6650-201ENSMUST00000166710 614 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm6680-201ENSMUST00000192789 950 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm36985-201ENSMUST00000195595 379 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm18748-201ENSMUST00000198507 622 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm43979-201ENSMUST00000203179 475 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm44583-201ENSMUST00000207478 281 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm45327-201ENSMUST00000211612 565 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm7639-201ENSMUST00000212608 484 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm18487-201ENSMUST00000215826 878 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 AC160114.1-201ENSMUST00000221930 365 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 CT030684.2-201ENSMUST00000228946 826 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm23448-201ENSMUST00000083151 104 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm23846-201ENSMUST00000083835 107 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm6982-201ENSMUST00000118752 1560 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 Gm7171-201ENSMUST00000177413 1349 ntBASIC4.43□□□□□ -1.7
Atg4aQ8C9S8 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Gm14932-201ENSMUST00000117112 453 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Gm12427-201ENSMUST00000117719 302 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Gm14939-201ENSMUST00000120347 680 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Gm9001-201ENSMUST00000121642 399 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Gm22988-201ENSMUST00000122759 144 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Gm23782-201ENSMUST00000157939 120 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Gm43493-201ENSMUST00000199837 202 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 AC159297.2-201ENSMUST00000219567 1075 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Gm4263-202ENSMUST00000221392 667 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Atg4aQ8C9S8 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm15783-201ENSMUST00000117521 633 ntBASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm24664-201ENSMUST00000158939 100 ntBASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm18406-201ENSMUST00000185872 669 ntBASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm28788-201ENSMUST00000189717 375 ntBASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm29558-201ENSMUST00000190134 375 ntBASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm37543-201ENSMUST00000192443 1031 ntBASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm38333-201ENSMUST00000193608 604 ntBASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm37987-201ENSMUST00000194999 825 ntBASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.41□□□□□ -1.7
Atg4aQ8C9S8 Gm45539-201ENSMUST00000210313 428 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms