Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm43624-201ENSMUST00000197368 180 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm5660-201ENSMUST00000197453 1149 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm43559-201ENSMUST00000198755 466 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm44261-201ENSMUST00000203337 209 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm44060-201ENSMUST00000204440 410 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm45689-201ENSMUST00000210522 133 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm18320-201ENSMUST00000211304 595 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 AC104832.1-201ENSMUST00000222938 550 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm25079-201ENSMUST00000082529 203 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm24460-201ENSMUST00000082731 106 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 AC108802.1-201ENSMUST00000219501 3142 ntBASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp40Q8BWR4 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Zscan4a-201ENSMUST00000210573 2279 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm6162-201ENSMUST00000194870 2930 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm24273-201ENSMUST00000102332 164 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm13439-201ENSMUST00000117541 409 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm14785-201ENSMUST00000120185 539 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm3835-201ENSMUST00000120752 403 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm11363-201ENSMUST00000121672 548 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm25909-201ENSMUST00000157619 121 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm23496-201ENSMUST00000157741 248 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm24853-201ENSMUST00000158026 121 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm24847-201ENSMUST00000158032 108 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Mir5134-201ENSMUST00000175529 78 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Mir496b-201ENSMUST00000184935 113 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm28843-201ENSMUST00000189198 678 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm29546-201ENSMUST00000191171 678 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm19147-201ENSMUST00000199622 652 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm43897-201ENSMUST00000204019 309 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm36247-201ENSMUST00000211834 285 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 AC109172.2-201ENSMUST00000228792 381 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 n-R5s167-201ENSMUST00000083227 121 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Gm7754-201ENSMUST00000223075 2064 ntBASIC6.1□□□□□ -1.43
Usp40Q8BWR4 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm8989-201ENSMUST00000184782 7275 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm22758-201ENSMUST00000102275 96 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm9836-201ENSMUST00000117132 216 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm13409-201ENSMUST00000122072 546 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm15534-201ENSMUST00000137642 562 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm26173-201ENSMUST00000158416 136 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Cfap61-214ENSMUST00000167179 183 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm11394-201ENSMUST00000181421 517 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm27957-201ENSMUST00000184054 127 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm28304-201ENSMUST00000185977 312 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm29256-201ENSMUST00000189094 312 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm28484-201ENSMUST00000190606 312 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm37050-201ENSMUST00000193464 466 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm29920-201ENSMUST00000206876 754 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 AC161520.1-201ENSMUST00000210954 939 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 AC154576.1-201ENSMUST00000225864 563 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 AC074315.1-201ENSMUST00000228801 214 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm24917-201ENSMUST00000083935 104 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms