Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Mir592-201ENSMUST00000102113 96 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm14816-201ENSMUST00000117174 294 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm12252-201ENSMUST00000119517 219 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm12486-201ENSMUST00000120887 541 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm12591-201ENSMUST00000122407 1177 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm25271-201ENSMUST00000157273 290 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm23824-201ENSMUST00000158741 276 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm16571-201ENSMUST00000159112 291 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm7241-201ENSMUST00000159853 357 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm22398-201ENSMUST00000174941 125 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm25731-201ENSMUST00000175167 125 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm22395-201ENSMUST00000177427 96 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm25942-201ENSMUST00000180080 110 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm27611-201ENSMUST00000184690 108 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm18547-201ENSMUST00000192439 811 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm44354-201ENSMUST00000196017 143 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm42814-201ENSMUST00000199370 460 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm44088-201ENSMUST00000204595 237 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm8423-201ENSMUST00000211387 607 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm7034-201ENSMUST00000218638 645 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm18704-201ENSMUST00000219736 446 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 AC124746.1-201ENSMUST00000227535 1300 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm15151-201ENSMUST00000117106 177 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm15126-201ENSMUST00000118631 833 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm14607-201ENSMUST00000119119 491 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm12495-201ENSMUST00000119750 447 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm16327-201ENSMUST00000137146 228 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm24850-201ENSMUST00000158029 119 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm27477-201ENSMUST00000184649 143 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28304-201ENSMUST00000185977 312 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm29256-201ENSMUST00000189094 312 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28484-201ENSMUST00000190606 312 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28155-201ENSMUST00000191066 151 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm30280-201ENSMUST00000192214 262 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm37098-201ENSMUST00000192290 244 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm8790-201ENSMUST00000194108 322 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm43853-201ENSMUST00000197162 301 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm17937-201ENSMUST00000197908 742 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm42474-201ENSMUST00000201073 505 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm7468-201ENSMUST00000203900 652 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm22304-201ENSMUST00000082688 129 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Snord22-201ENSMUST00000083153 126 ntBASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ccdc40Q8BI79 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms