Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm43405-201ENSMUST00000198642 337 ntBASIC5.54□□□□□ -1.52
Ubp1Q811S7 Gm44055-201ENSMUST00000204376 247 ntBASIC5.54□□□□□ -1.52
Ubp1Q811S7 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.54□□□□□ -1.52
Ubp1Q811S7 Gm44765-201ENSMUST00000206927 601 ntBASIC5.54□□□□□ -1.52
Ubp1Q811S7 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.54□□□□□ -1.52
Ubp1Q811S7 Gm19326-201ENSMUST00000219818 326 ntBASIC5.54□□□□□ -1.52
Ubp1Q811S7 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.54□□□□□ -1.52
Ubp1Q811S7 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC5.54□□□□□ -1.52
Ubp1Q811S7 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.54□□□□□ -1.52
Ubp1Q811S7 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.54□□□□□ -1.52
Ubp1Q811S7 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ubp1Q811S7 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ubp1Q811S7 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.54□□□□□ -1.52
Ubp1Q811S7 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.54□□□□□ -1.52
Ubp1Q811S7 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ubp1Q811S7 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ubp1Q811S7 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ubp1Q811S7 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.54□□□□□ -1.52
Ubp1Q811S7 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Ubp1Q811S7 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm37387-201ENSMUST00000192201 1806 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm26078-201ENSMUST00000104067 128 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm11576-201ENSMUST00000117433 417 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm25342-201ENSMUST00000157459 122 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm23539-201ENSMUST00000157537 224 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm22675-201ENSMUST00000158430 104 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm3076-201ENSMUST00000161613 451 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm26180-201ENSMUST00000179942 107 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm4842-201ENSMUST00000183237 835 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm27855-201ENSMUST00000184122 128 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm28385-201ENSMUST00000185671 292 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm3605-201ENSMUST00000185858 440 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm28353-201ENSMUST00000186482 570 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm28533-201ENSMUST00000186741 570 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm18551-201ENSMUST00000195594 642 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm44820-201ENSMUST00000207420 396 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm23686-201ENSMUST00000083241 164 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.53□□□□□ -1.52
Ubp1Q811S7 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ubp1Q811S7 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubp1Q811S7 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm11486-201ENSMUST00000107322 478 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm14622-201ENSMUST00000117117 468 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm4989-201ENSMUST00000118711 749 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm8217-201ENSMUST00000119136 465 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm15044-201ENSMUST00000120703 598 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm26372-201ENSMUST00000157831 236 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm24534-201ENSMUST00000157949 291 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm25363-201ENSMUST00000158850 245 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm29489-201ENSMUST00000188934 324 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm28654-201ENSMUST00000189801 379 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm38131-201ENSMUST00000192449 430 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms