Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm44059-201ENSMUST00000204048 351 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm7726-201ENSMUST00000206241 231 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm5338-201ENSMUST00000209530 639 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 AC145736.1-201ENSMUST00000214661 479 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm14797-201ENSMUST00000119378 1480 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm23746-201ENSMUST00000104229 125 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Mir883a-201ENSMUST00000104824 76 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm14981-201ENSMUST00000117325 943 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm14628-201ENSMUST00000117508 635 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm12495-201ENSMUST00000119750 447 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm14303-201ENSMUST00000121320 171 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm25264-201ENSMUST00000158519 117 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm9593-201ENSMUST00000166034 469 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm16378-201ENSMUST00000179168 342 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm23648-201ENSMUST00000180301 107 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm27845-201ENSMUST00000184479 114 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm20811-201ENSMUST00000190500 553 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm37881-201ENSMUST00000193001 421 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm44485-201ENSMUST00000199569 137 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm38395-201ENSMUST00000199904 830 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm29754-201ENSMUST00000206269 358 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm6303-201ENSMUST00000210123 471 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm23506-201ENSMUST00000083077 107 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm23875-201ENSMUST00000083711 318 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Olfr203-201ENSMUST00000089305 924 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.43□□□□□ -1.7
Ubfd1Q78JW9 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm15094-201ENSMUST00000118394 1131 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm15025-201ENSMUST00000118434 418 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm11404-201ENSMUST00000120872 494 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm22958-201ENSMUST00000122512 184 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm23379-201ENSMUST00000180026 107 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm27611-201ENSMUST00000184690 108 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm29950-201ENSMUST00000195273 237 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm42438-201ENSMUST00000197832 974 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm3010-201ENSMUST00000198805 448 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm43975-201ENSMUST00000203023 481 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms