Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm38234-201ENSMUST00000195204 421 ntBASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Gm45498-201ENSMUST00000210346 283 ntBASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Gm17829-201ENSMUST00000219782 344 ntBASIC5.05□□□□□ -1.6
Ddx58Q6Q899 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 AC113031.2-201ENSMUST00000226132 579 ntBASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Gm24928-201ENSMUST00000083399 107 ntBASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Mir215-201ENSMUST00000083628 112 ntBASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Gm25897-201ENSMUST00000083709 107 ntBASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddx58Q6Q899 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm12873-201ENSMUST00000119988 422 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm14913-201ENSMUST00000120011 1093 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm13865-201ENSMUST00000120957 865 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm2182-201ENSMUST00000145243 663 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm25555-201ENSMUST00000158078 111 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm25037-201ENSMUST00000175418 110 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm10292-201ENSMUST00000183142 581 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Mir8118-201ENSMUST00000183962 129 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm29097-201ENSMUST00000190273 422 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 CT010511.1-201ENSMUST00000224570 315 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 AC154462.1-201ENSMUST00000228897 2260 ntBASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx58Q6Q899 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm12667-201ENSMUST00000118299 1332 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm4736-201ENSMUST00000100870 380 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm23271-201ENSMUST00000104052 124 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm14107-201ENSMUST00000117774 330 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm14238-201ENSMUST00000120227 323 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm13852-201ENSMUST00000122350 242 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm26148-201ENSMUST00000157430 68 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm24675-201ENSMUST00000158757 259 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm22120-201ENSMUST00000175590 70 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm28118-201ENSMUST00000185957 294 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm6501-201ENSMUST00000187178 916 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm42958-201ENSMUST00000197595 318 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm44634-201ENSMUST00000206119 152 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm6112-201ENSMUST00000208037 629 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm45539-201ENSMUST00000210313 428 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 AC102815.1-201ENSMUST00000226662 1061 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm6462-201ENSMUST00000081488 304 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Mir370-201ENSMUST00000083499 79 ntBASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ddx58Q6Q899 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ddx58Q6Q899 AC115034.1-201ENSMUST00000215393 3846 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms