Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm25088-201ENSMUST00000101803 79 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm12543-201ENSMUST00000120410 543 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm11825-201ENSMUST00000120710 736 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm14980-201ENSMUST00000121247 736 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm25342-201ENSMUST00000157459 122 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm23124-201ENSMUST00000157650 107 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm3470-201ENSMUST00000160819 420 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm27210-201ENSMUST00000184263 402 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm4854-201ENSMUST00000185902 574 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm28995-201ENSMUST00000186625 261 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm43723-201ENSMUST00000196886 189 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm9560-201ENSMUST00000205012 1201 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm44002-201ENSMUST00000205134 594 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm2926-201ENSMUST00000205625 239 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm7786-201ENSMUST00000210494 436 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 AC160031.1-201ENSMUST00000219914 522 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm31849-201ENSMUST00000220306 375 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 CT030184.1-201ENSMUST00000222393 416 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 AC115289.1-201ENSMUST00000224915 522 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Clec2j-201ENSMUST00000032517 515 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm23733-201ENSMUST00000083750 106 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 n-R5s3-201ENSMUST00000083879 112 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm6177-201ENSMUST00000085589 465 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scaf4Q6PFF0 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5□□□□□ -1.61
Scaf4Q6PFF0 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Scaf4Q6PFF0 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm14125-201ENSMUST00000113442 680 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm14933-201ENSMUST00000118840 481 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm12053-201ENSMUST00000119022 252 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm11631-201ENSMUST00000119220 156 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm12244-201ENSMUST00000119500 291 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm5942-201ENSMUST00000120046 439 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm15177-201ENSMUST00000120491 577 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm22960-201ENSMUST00000122517 104 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm24836-201ENSMUST00000122609 108 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm22136-201ENSMUST00000158751 268 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm16566-201ENSMUST00000160387 910 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm25246-201ENSMUST00000175476 69 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm22911-201ENSMUST00000177920 107 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm25671-201ENSMUST00000178612 105 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm26177-201ENSMUST00000178683 107 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm23307-201ENSMUST00000179167 105 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm25286-201ENSMUST00000179790 105 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Mir6238-201ENSMUST00000184140 129 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm29813-201ENSMUST00000195856 447 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm43215-201ENSMUST00000199108 252 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 CT030187.1-201ENSMUST00000220605 252 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 AC114572.1-201ENSMUST00000227262 300 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 AC107711.2-203ENSMUST00000227827 762 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm24622-201ENSMUST00000082619 162 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm23515-201ENSMUST00000082829 107 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm24042-201ENSMUST00000083114 103 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Scaf4Q6PFF0 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms