Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.65□□□□□ -1.67
Sp140Q6NSQ5 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sp140Q6NSQ5 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
Sp140Q6NSQ5 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm25213-201ENSMUST00000102388 113 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Mir208b-201ENSMUST00000104735 77 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm14750-201ENSMUST00000118262 516 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm13430-201ENSMUST00000121366 288 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm25559-201ENSMUST00000157182 74 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm24636-201ENSMUST00000158673 288 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm8161-201ENSMUST00000168739 481 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm5527-201ENSMUST00000179821 642 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm37961-201ENSMUST00000192729 299 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm20162-201ENSMUST00000193629 871 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm43370-201ENSMUST00000196437 284 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm45366-201ENSMUST00000209828 384 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm45857-201ENSMUST00000212207 356 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm3338-201ENSMUST00000220982 269 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm23626-201ENSMUST00000082458 133 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.64□□□□□ -1.67
Sp140Q6NSQ5 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm22020-201ENSMUST00000104358 136 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm3940-201ENSMUST00000105087 432 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm14771-201ENSMUST00000118249 203 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm14793-201ENSMUST00000118739 311 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm11352-201ENSMUST00000119264 517 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm13232-201ENSMUST00000121816 632 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm2182-201ENSMUST00000145243 663 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm24507-201ENSMUST00000157683 134 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm15838-201ENSMUST00000161575 180 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm9892-201ENSMUST00000182415 992 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm38150-201ENSMUST00000192996 452 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm36953-201ENSMUST00000195295 268 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm37119-201ENSMUST00000195691 389 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm43828-201ENSMUST00000196890 639 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm43724-201ENSMUST00000197516 226 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm36382-201ENSMUST00000198892 541 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm44726-201ENSMUST00000203427 217 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm44054-201ENSMUST00000203814 372 ntBASIC4.63□□□□□ -1.67
Sp140Q6NSQ5 Gm18306-201ENSMUST00000207338 569 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms