Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.82□□□□□ -1.8
Six3Q62233 Gm28655-201ENSMUST00000191538 692 ntBASIC3.82□□□□□ -1.8
Six3Q62233 Gm38270-201ENSMUST00000192721 407 ntBASIC3.82□□□□□ -1.8
Six3Q62233 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Six3Q62233 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Six3Q62233 Gm18100-201ENSMUST00000200897 452 ntBASIC3.82□□□□□ -1.8
Six3Q62233 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.82□□□□□ -1.8
Six3Q62233 Gm43979-201ENSMUST00000203179 475 ntBASIC3.82□□□□□ -1.8
Six3Q62233 Gm18944-201ENSMUST00000207672 643 ntBASIC3.82□□□□□ -1.8
Six3Q62233 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.82□□□□□ -1.8
Six3Q62233 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Six3Q62233 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.82□□□□□ -1.8
Six3Q62233 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.82□□□□□ -1.8
Six3Q62233 Gm46369-201ENSMUST00000221577 401 ntBASIC3.82□□□□□ -1.8
Six3Q62233 Gm3565-201ENSMUST00000222670 609 ntBASIC3.82□□□□□ -1.8
Six3Q62233 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.82□□□□□ -1.8
Six3Q62233 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.82□□□□□ -1.8
Six3Q62233 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Six3Q62233 Snord22-201ENSMUST00000083153 126 ntBASIC3.82□□□□□ -1.8
Six3Q62233 Gm23452-201ENSMUST00000083327 107 ntBASIC3.82□□□□□ -1.8
Six3Q62233 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Six3Q62233 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Six3Q62233 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Six3Q62233 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.82□□□□□ -1.8
Six3Q62233 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Six3Q62233 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Six3Q62233 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Six3Q62233 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Six3Q62233 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 Gm23133-201ENSMUST00000104255 135 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Six3Q62233 Gm23178-201ENSMUST00000116782 95 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm13607-201ENSMUST00000117875 539 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm15364-201ENSMUST00000119618 585 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm13865-201ENSMUST00000120957 865 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.81□□□□□ -1.8
Six3Q62233 Gm23231-201ENSMUST00000157299 104 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm2862-201ENSMUST00000161524 328 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm4207-201ENSMUST00000173144 960 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm24080-201ENSMUST00000175178 232 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm22776-201ENSMUST00000178634 94 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm23767-201ENSMUST00000179278 94 ntBASIC3.81□□□□□ -1.8
Six3Q62233 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Six3Q62233 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 Gm29460-201ENSMUST00000188607 714 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Six3Q62233 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Six3Q62233 Gm38280-201ENSMUST00000192610 158 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Six3Q62233 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm45031-201ENSMUST00000206800 288 ntBASIC3.81□□□□□ -1.8
Six3Q62233 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Six3Q62233 Gm45696-201ENSMUST00000212088 985 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm45727-201ENSMUST00000212886 572 ntBASIC3.81□□□□□ -1.8
Six3Q62233 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.81□□□□□ -1.8
Six3Q62233 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Six3Q62233 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.81□□□□□ -1.8
Six3Q62233 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.81□□□□□ -1.8
Six3Q62233 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Six3Q62233 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
Six3Q62233 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Six3Q62233 Snord21-201ENSMUST00000082519 94 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Snord14e-201ENSMUST00000082857 90 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Gm23875-201ENSMUST00000083711 318 ntBASIC3.81□□□□□ -1.8
Six3Q62233 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Six3Q62233 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Six3Q62233 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Six3Q62233 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.81□□□□□ -1.8
Six3Q62233 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Six3Q62233 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Six3Q62233 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.8□□□□□ -1.8
Six3Q62233 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Six3Q62233 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Six3Q62233 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Six3Q62233 Gm4736-201ENSMUST00000100870 380 ntBASIC3.8□□□□□ -1.8
Six3Q62233 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Six3Q62233 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Six3Q62233 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.8□□□□□ -1.8
Six3Q62233 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Six3Q62233 Gm2003-201ENSMUST00000118537 636 ntBASIC3.8□□□□□ -1.8
Six3Q62233 Gm13831-201ENSMUST00000118764 302 ntBASIC3.8□□□□□ -1.8
Six3Q62233 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.8□□□□□ -1.8
Six3Q62233 Gm13170-201ENSMUST00000119716 643 ntBASIC3.8□□□□□ -1.8
Six3Q62233 Gm13687-201ENSMUST00000119857 282 ntBASIC3.8□□□□□ -1.8
Six3Q62233 Gm11645-201ENSMUST00000121589 649 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms