Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC3.9□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm43932-201ENSMUST00000204499 52 ntBASIC3.9□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Ccdc88aQ5SNZ0 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm22939-201ENSMUST00000103958 131 ntBASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm42824-201ENSMUST00000199361 247 ntBASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm45317-201ENSMUST00000210385 223 ntBASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm336-201ENSMUST00000186376 1480 ntBASIC3.89□□□□□ -1.79
Ccdc88aQ5SNZ0 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm25025-201ENSMUST00000175018 111 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm42621-201ENSMUST00000198114 275 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm26387-201ENSMUST00000104238 132 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm12858-201ENSMUST00000121913 208 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm22956-201ENSMUST00000122520 80 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm25392-201ENSMUST00000157335 297 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm22664-201ENSMUST00000158719 105 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm22116-201ENSMUST00000158791 141 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm9379-201ENSMUST00000196790 646 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Snora31-201ENSMUST00000083213 130 ntBASIC3.88□□□□□ -1.79
Ccdc88aQ5SNZ0 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm15190-201ENSMUST00000120855 276 ntBASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm32340-201ENSMUST00000192883 259 ntBASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm25203-202ENSMUST00000200458 216 ntBASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm25203-201ENSMUST00000082842 215 ntBASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc88aQ5SNZ0 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm22988-201ENSMUST00000122759 144 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm6947-201ENSMUST00000186254 78 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm43899-201ENSMUST00000203675 246 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm18644-201ENSMUST00000211458 815 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm17917-201ENSMUST00000218561 953 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm14385-201ENSMUST00000116315 876 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Mir1198-201ENSMUST00000116995 121 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm6969-201ENSMUST00000140065 342 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Snord7-201ENSMUST00000083781 97 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms