Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm23577-201ENSMUST00000103950 110 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm23319-201ENSMUST00000104467 131 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm26341-201ENSMUST00000104561 134 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm14825-201ENSMUST00000113538 701 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm13379-201ENSMUST00000118053 621 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm11356-201ENSMUST00000118974 192 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm12768-201ENSMUST00000120055 759 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm15387-201ENSMUST00000120421 648 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm15147-201ENSMUST00000122263 483 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm6058-201ENSMUST00000154261 399 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm23168-201ENSMUST00000157156 143 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm23033-201ENSMUST00000157996 134 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm22839-201ENSMUST00000158436 304 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm24736-201ENSMUST00000158862 130 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm15974-201ENSMUST00000159103 531 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm10075-201ENSMUST00000162030 545 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm37164-201ENSMUST00000192809 637 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm38221-201ENSMUST00000195146 365 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm18150-201ENSMUST00000195341 645 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 AC174780.1-201ENSMUST00000199415 1107 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 AC152979.3-201ENSMUST00000217720 479 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm4263-202ENSMUST00000221392 667 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 AC152169.2-201ENSMUST00000224558 613 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm12582-201ENSMUST00000030555 697 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm5518-201ENSMUST00000084171 648 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.19□□□□□ -2.06
Trav3-1Q5R1I8 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Mir466j-201ENSMUST00000116876 122 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm14688-201ENSMUST00000119169 303 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm9440-201ENSMUST00000119667 539 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm11385-201ENSMUST00000121513 570 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm24914-201ENSMUST00000157285 313 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm23903-201ENSMUST00000157566 131 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm23700-201ENSMUST00000158842 102 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm2862-201ENSMUST00000161524 328 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm3531-201ENSMUST00000162698 489 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm20397-201ENSMUST00000174520 362 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm6625-201ENSMUST00000177870 272 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Mir6393-201ENSMUST00000183709 94 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Mir6996-201ENSMUST00000183922 61 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Mir6391-201ENSMUST00000184391 104 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm29663-201ENSMUST00000186962 853 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm6801-201ENSMUST00000190697 339 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm38214-201ENSMUST00000192581 988 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm2053-201ENSMUST00000195671 631 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm44348-201ENSMUST00000200165 122 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm3189-201ENSMUST00000205595 832 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Fth-ps3-201ENSMUST00000210405 358 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm45434-201ENSMUST00000210550 293 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Prl7a1-203ENSMUST00000224852 1283 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms