Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Gm23791-201ENSMUST00000122553 293 ntBASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Gm22988-201ENSMUST00000122759 144 ntBASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Mir6398-201ENSMUST00000184541 102 ntBASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Gm37490-201ENSMUST00000195566 724 ntBASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Gm18433-202ENSMUST00000195682 196 ntBASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Gm44092-201ENSMUST00000204470 258 ntBASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Gm44399-201ENSMUST00000205043 226 ntBASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 AC153924.1-201ENSMUST00000220117 312 ntBASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Gm650-201ENSMUST00000144428 1551 ntBASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Gm43889-201ENSMUST00000203950 3681 ntBASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Gm3123-201ENSMUST00000163480 480 ntBASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Gm26061-201ENSMUST00000175584 108 ntBASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Gm44972-201ENSMUST00000206419 406 ntBASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc88bQ4QRL3 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm44525-201ENSMUST00000183129 2634 ntBASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm23766-201ENSMUST00000103894 80 ntBASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm14788-201ENSMUST00000119457 375 ntBASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm12222-201ENSMUST00000121368 260 ntBASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm14162-201ENSMUST00000121985 601 ntBASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm4945-201ENSMUST00000075152 453 ntBASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.36□□□□□ -1.55
Ccdc88bQ4QRL3 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Gm8475-201ENSMUST00000118211 526 ntBASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 n-R5s32-201ENSMUST00000122495 103 ntBASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Gm16218-201ENSMUST00000155424 388 ntBASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Gm13147-202ENSMUST00000177526 1173 ntBASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Gm8242-202ENSMUST00000193056 475 ntBASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc88bQ4QRL3 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm37674-201ENSMUST00000194177 1834 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm7470-201ENSMUST00000194219 2095 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm13167-201ENSMUST00000118554 578 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm14901-201ENSMUST00000119001 283 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm6797-201ENSMUST00000119440 512 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm12617-201ENSMUST00000121268 381 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm24958-201ENSMUST00000158009 97 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm18604-201ENSMUST00000172535 558 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm28594-201ENSMUST00000187022 661 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm18445-201ENSMUST00000195502 774 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm44308-201ENSMUST00000197080 99 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm42578-201ENSMUST00000199960 194 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm42758-201ENSMUST00000202146 283 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm18602-201ENSMUST00000209794 851 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 AC154527.5-201ENSMUST00000224448 496 ntBASIC5.34□□□□□ -1.55
Ccdc88bQ4QRL3 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ccdc88bQ4QRL3 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Ccdc88bQ4QRL3 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ccdc88bQ4QRL3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC5.33□□□□□ -1.56
Ccdc88bQ4QRL3 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc88bQ4QRL3 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Ccdc88bQ4QRL3 AC153932.1-201ENSMUST00000218558 787 ntBASIC5.33□□□□□ -1.56
Ccdc88bQ4QRL3 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.33□□□□□ -1.56
Ccdc88bQ4QRL3 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms