Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 AC154184.1-201ENSMUST00000224375 1620 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.68□□□□□ -1.82
Trim40Q3UWA4 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm23256-201ENSMUST00000102235 110 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm26140-201ENSMUST00000103807 110 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm13831-201ENSMUST00000118764 302 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm14907-201ENSMUST00000121948 854 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm25908-201ENSMUST00000157624 98 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm22908-201ENSMUST00000177620 110 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm25942-201ENSMUST00000180080 110 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm37167-201ENSMUST00000194946 396 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm5317-201ENSMUST00000204445 847 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm18944-201ENSMUST00000207672 643 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 AC127302.1-201ENSMUST00000215973 1111 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 AC158523.2-201ENSMUST00000222708 548 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.67□□□□□ -1.82
Trim40Q3UWA4 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm12173-201ENSMUST00000117622 273 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm13064-201ENSMUST00000119125 557 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm12852-201ENSMUST00000119478 719 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm14534-201ENSMUST00000120045 357 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm11233-201ENSMUST00000122357 634 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm22036-201ENSMUST00000157279 215 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm18128-201ENSMUST00000172625 511 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm13249-201ENSMUST00000177803 345 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm13144-201ENSMUST00000179385 345 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 S100a11-ps-201ENSMUST00000181735 306 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm28997-201ENSMUST00000188759 429 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm38281-201ENSMUST00000192301 315 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm43814-201ENSMUST00000197851 413 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm44032-201ENSMUST00000204841 166 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm44757-201ENSMUST00000206373 157 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm18672-201ENSMUST00000208035 270 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm19134-201ENSMUST00000221203 487 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 AC121114.1-201ENSMUST00000228522 570 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms