Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm17177-201ENSMUST00000169144 483 ntBASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Gm27249-201ENSMUST00000185049 328 ntBASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Gm44059-201ENSMUST00000204048 351 ntBASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Gm9712-201ENSMUST00000210842 311 ntBASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Gm45735-201ENSMUST00000212779 319 ntBASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Gm24533-201ENSMUST00000083138 196 ntBASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Olfr1160-201ENSMUST00000099839 960 ntBASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3aQ3ULJ3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm14776-201ENSMUST00000121029 887 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm13743-201ENSMUST00000121486 724 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm26371-201ENSMUST00000157829 104 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm24534-201ENSMUST00000157949 291 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm23385-201ENSMUST00000158592 295 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm28920-201ENSMUST00000189957 699 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm36382-201ENSMUST00000198892 541 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm44084-201ENSMUST00000203947 409 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm44232-201ENSMUST00000204537 225 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm10237-201ENSMUST00000078393 273 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm24917-201ENSMUST00000083935 104 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Upf3aQ3ULJ3 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm12125-201ENSMUST00000117261 736 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm12902-201ENSMUST00000118389 322 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm13788-201ENSMUST00000120767 601 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm26028-201ENSMUST00000158660 294 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm23775-201ENSMUST00000158991 249 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm27427-201ENSMUST00000185134 193 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm42832-201ENSMUST00000196361 745 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm4859-201ENSMUST00000199625 787 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.79□□□□□ -1.8
Upf3aQ3ULJ3 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Upf3aQ3ULJ3 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms