Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm15399-201ENSMUST00000118055 724 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm8129-201ENSMUST00000118230 213 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm13491-201ENSMUST00000118267 235 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm11790-201ENSMUST00000119569 455 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm14919-201ENSMUST00000120839 390 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm24931-201ENSMUST00000158324 107 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm23568-201ENSMUST00000177960 92 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm24829-201ENSMUST00000179245 92 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm10193-201ENSMUST00000188288 231 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm2142-201ENSMUST00000197899 589 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm44718-201ENSMUST00000206886 359 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm18644-201ENSMUST00000211458 815 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 AC154600.1-201ENSMUST00000226480 714 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp39Q3TIX9 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm14638-201ENSMUST00000121338 216 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm22277-201ENSMUST00000157204 277 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm23534-201ENSMUST00000157539 97 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm24875-201ENSMUST00000158888 104 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm28957-201ENSMUST00000190174 373 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm44485-201ENSMUST00000199569 137 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm43406-201ENSMUST00000200356 334 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm4714-201ENSMUST00000203395 279 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm34224-201ENSMUST00000204606 364 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm7751-201ENSMUST00000212868 709 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm19219-201ENSMUST00000215863 724 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm8681-201ENSMUST00000219115 618 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm9845-201ENSMUST00000056409 598 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms