Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col8a1Q00780 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col8a1Q00780 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col8a1Q00780 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col8a1Q00780 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col8a1Q00780 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm42496-201ENSMUST00000197976 3241 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col8a1Q00780 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col8a1Q00780 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
Col8a1Q00780 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm8475-201ENSMUST00000118211 526 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm13082-201ENSMUST00000118877 561 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm15387-201ENSMUST00000120421 648 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Col8a1Q00780 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm26085-201ENSMUST00000157900 116 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm22136-201ENSMUST00000158751 268 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm6632-201ENSMUST00000168425 954 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm18953-201ENSMUST00000175694 300 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm27834-201ENSMUST00000183427 125 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Mir6907-201ENSMUST00000183764 71 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm27636-201ENSMUST00000184528 122 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm27387-201ENSMUST00000184583 116 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm36984-201ENSMUST00000192770 235 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm37272-201ENSMUST00000193401 488 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm2147-201ENSMUST00000193588 639 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm5842-201ENSMUST00000195073 622 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm8719-201ENSMUST00000203602 534 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm45590-201ENSMUST00000209715 262 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm2446-201ENSMUST00000220144 772 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm8785-201ENSMUST00000220259 487 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col8a1Q00780 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col8a1Q00780 n-R5s65-201ENSMUST00000082614 117 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm22220-201ENSMUST00000082671 149 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm23508-201ENSMUST00000083079 72 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm5518-201ENSMUST00000084171 648 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm44586-201ENSMUST00000207166 2737 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col8a1Q00780 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.5□□□□□ -1.69
Col8a1Q00780 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col8a1Q00780 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col8a1Q00780 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.49□□□□□ -1.69
Col8a1Q00780 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm43361-201ENSMUST00000196562 4690 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Col8a1Q00780 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col8a1Q00780 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col8a1Q00780 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm7925-201ENSMUST00000166690 401 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm17081-201ENSMUST00000167363 478 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm28094-201ENSMUST00000185262 390 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm28769-201ENSMUST00000190176 615 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm44319-201ENSMUST00000196974 93 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 Mir142-201ENSMUST00000198092 64 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm45150-201ENSMUST00000206051 467 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm7380-201ENSMUST00000211599 466 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 AC160031.1-201ENSMUST00000219914 522 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 CT030187.1-201ENSMUST00000220605 252 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 CT025686.1-201ENSMUST00000227592 438 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm23515-201ENSMUST00000082829 107 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms