Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm25066-201ENSMUST00000158145 123 ntBASIC3.45□□□□□ -1.86
Shox2P70390 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Shox2P70390 Mir3473a-201ENSMUST00000175011 78 ntBASIC3.45□□□□□ -1.86
Shox2P70390 Gm26219-201ENSMUST00000175216 71 ntBASIC3.45□□□□□ -1.86
Shox2P70390 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Shox2P70390 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.45□□□□□ -1.86
Shox2P70390 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.45□□□□□ -1.86
Shox2P70390 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.45□□□□□ -1.86
Shox2P70390 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.45□□□□□ -1.86
Shox2P70390 Gm18433-202ENSMUST00000195682 196 ntBASIC3.45□□□□□ -1.86
Shox2P70390 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.45□□□□□ -1.86
Shox2P70390 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.45□□□□□ -1.86
Shox2P70390 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.45□□□□□ -1.86
Shox2P70390 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.45□□□□□ -1.86
Shox2P70390 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.45□□□□□ -1.86
Shox2P70390 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Shox2P70390 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.45□□□□□ -1.86
Shox2P70390 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Shox2P70390 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Shox2P70390 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.45□□□□□ -1.86
Shox2P70390 Gm10042-201ENSMUST00000079884 78 ntBASIC3.45□□□□□ -1.86
Shox2P70390 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.45□□□□□ -1.86
Shox2P70390 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Shox2P70390 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Shox2P70390 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.45□□□□□ -1.86
Shox2P70390 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
Shox2P70390 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Shox2P70390 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Shox2P70390 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Shox2P70390 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Shox2P70390 Gm24581-201ENSMUST00000103962 133 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm4910-201ENSMUST00000119605 366 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm9043-201ENSMUST00000119677 314 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm13557-201ENSMUST00000120771 382 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm13692-201ENSMUST00000120774 371 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm11506-201ENSMUST00000122414 470 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Shox2P70390 Gm25436-201ENSMUST00000158275 145 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm25606-201ENSMUST00000158363 95 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm22011-201ENSMUST00000158790 123 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm23702-201ENSMUST00000158840 130 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Shox2P70390 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Shox2P70390 Mir7050-201ENSMUST00000184636 60 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm28877-201ENSMUST00000191349 604 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm37343-201ENSMUST00000192542 111 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm37698-201ENSMUST00000192605 463 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm7449-201ENSMUST00000194393 663 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.44□□□□□ -1.86
Shox2P70390 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.44□□□□□ -1.86
Shox2P70390 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Shox2P70390 Gm35405-201ENSMUST00000218754 400 ntBASIC3.44□□□□□ -1.86
Shox2P70390 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.44□□□□□ -1.86
Shox2P70390 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.44□□□□□ -1.86
Shox2P70390 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Shox2P70390 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Shox2P70390 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Shox2P70390 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Shox2P70390 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Shox2P70390 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Shox2P70390 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Shox2P70390 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Shox2P70390 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Shox2P70390 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Shox2P70390 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Shox2P70390 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Shox2P70390 Gm4725-201ENSMUST00000151048 587 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Gm23959-201ENSMUST00000157208 324 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.43□□□□□ -1.86
Shox2P70390 Gm8224-201ENSMUST00000166178 497 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Gm25817-201ENSMUST00000177758 121 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Gm24766-201ENSMUST00000179182 121 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Shox2P70390 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Shox2P70390 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Shox2P70390 Gm44354-201ENSMUST00000196017 143 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Gm42832-201ENSMUST00000196361 745 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.43□□□□□ -1.86
Shox2P70390 Gm43440-201ENSMUST00000201957 729 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Gm44475-201ENSMUST00000204041 424 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Gm44059-201ENSMUST00000204048 351 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.43□□□□□ -1.86
Shox2P70390 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.43□□□□□ -1.86
Shox2P70390 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.43□□□□□ -1.86
Shox2P70390 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC3.43□□□□□ -1.86
Shox2P70390 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.43□□□□□ -1.86
Shox2P70390 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC3.43□□□□□ -1.86
Shox2P70390 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Shox2P70390 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Shox2P70390 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Shox2P70390 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shox2P70390 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shox2P70390 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Shox2P70390 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.42□□□□□ -1.86
Shox2P70390 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Shox2P70390 Gm26145-201ENSMUST00000104476 127 ntBASIC3.42□□□□□ -1.86
Shox2P70390 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.42□□□□□ -1.86
Shox2P70390 Gm12448-201ENSMUST00000118852 655 ntBASIC3.42□□□□□ -1.86
Shox2P70390 Gm5924-201ENSMUST00000132554 871 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms