Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm11394-201ENSMUST00000181421 517 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Mir7211-201ENSMUST00000184071 63 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm27818-201ENSMUST00000184536 159 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 Mir7674-201ENSMUST00000184964 63 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm28781-201ENSMUST00000185760 696 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm29307-201ENSMUST00000187367 696 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 Gm29339-201ENSMUST00000189613 696 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm29407-201ENSMUST00000191468 696 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC6.07□□□□□ -1.44
Rfx1P48377 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
Rfx1P48377 AC123064.2-201ENSMUST00000217758 193 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 AC152979.1-201ENSMUST00000218214 289 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 AC147240.1-201ENSMUST00000218767 431 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx1P48377 Gm16335-201ENSMUST00000077495 309 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm26228-201ENSMUST00000082512 107 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm25080-201ENSMUST00000082526 107 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm25518-201ENSMUST00000083864 107 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx1P48377 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx1P48377 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx1P48377 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx1P48377 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx1P48377 Gm43696-201ENSMUST00000199385 6071 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Rfx1P48377 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx1P48377 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Gm14101-201ENSMUST00000121502 473 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC6.06□□□□□ -1.44
Rfx1P48377 Gm23078-201ENSMUST00000157848 148 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx1P48377 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
Rfx1P48377 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Rfx1P48377 Gm28847-201ENSMUST00000186778 700 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC6.06□□□□□ -1.44
Rfx1P48377 Gm29376-201ENSMUST00000189357 835 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Gm28506-201ENSMUST00000189937 150 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC6.06□□□□□ -1.44
Rfx1P48377 Mir219c-201ENSMUST00000199860 60 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Gm45171-201ENSMUST00000206360 736 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Gm17988-201ENSMUST00000208796 535 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Gm45438-201ENSMUST00000210242 564 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 LOC665443-201ENSMUST00000212284 796 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Rfx1P48377 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rfx1P48377 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rfx1P48377 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx1P48377 Gm38388-201ENSMUST00000195569 1430 ntBASIC6.06□□□□□ -1.44
Rfx1P48377 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Rfx1P48377 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.06□□□□□ -1.44
Rfx1P48377 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx1P48377 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rfx1P48377 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC6.06□□□□□ -1.44
Rfx1P48377 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Rfx1P48377 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm3972-201ENSMUST00000173960 2861 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm43024-201ENSMUST00000196770 4352 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Rfx1P48377 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rfx1P48377 Gm26067-201ENSMUST00000103789 110 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Rfx1P48377 Gm22468-201ENSMUST00000116680 120 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm26248-201ENSMUST00000116700 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm26137-201ENSMUST00000116701 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm26190-201ENSMUST00000116704 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm24617-201ENSMUST00000116705 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm25778-201ENSMUST00000116713 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm25774-201ENSMUST00000116717 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm22102-201ENSMUST00000116730 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm23177-201ENSMUST00000116784 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm24193-201ENSMUST00000116801 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm24744-201ENSMUST00000116833 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm24427-201ENSMUST00000116896 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm22346-201ENSMUST00000116918 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm23606-201ENSMUST00000116938 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm22029-201ENSMUST00000116940 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm26298-201ENSMUST00000116956 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm23844-201ENSMUST00000116959 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm24484-201ENSMUST00000117009 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm25347-201ENSMUST00000117026 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm22112-201ENSMUST00000117032 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Gm15333-201ENSMUST00000118825 364 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms