Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Msx1P13297 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Msx1P13297 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Gm15195-201ENSMUST00000118775 263 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Gm12779-201ENSMUST00000121496 143 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Gm25624-201ENSMUST00000157222 275 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Gm22145-201ENSMUST00000157396 148 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.72□□□□□ -1.49
Msx1P13297 Gm20397-201ENSMUST00000174520 362 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Mir7685-201ENSMUST00000183555 62 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Gm43407-201ENSMUST00000199816 317 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Gm45367-201ENSMUST00000210171 347 ntBASIC5.72□□□□□ -1.49
Msx1P13297 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.72□□□□□ -1.49
Msx1P13297 Gm3785-201ENSMUST00000221000 202 ntBASIC5.72□□□□□ -1.49
Msx1P13297 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Gm5321-201ENSMUST00000072050 447 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Mir452-201ENSMUST00000093629 85 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Msx1P13297 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.72□□□□□ -1.49
Msx1P13297 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Msx1P13297 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Msx1P13297 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Msx1P13297 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.71□□□□□ -1.49
Msx1P13297 AW046200-203ENSMUST00000211787 2479 ntBASIC5.71□□□□□ -1.49
Msx1P13297 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Msx1P13297 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Msx1P13297 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm12417-201ENSMUST00000119153 403 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm14877-201ENSMUST00000119803 478 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Gm8880-201ENSMUST00000121800 454 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm22849-201ENSMUST00000157713 307 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm10075-201ENSMUST00000162030 545 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm16378-201ENSMUST00000179168 342 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm24957-201ENSMUST00000179604 132 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.71□□□□□ -1.5
Msx1P13297 Gm32340-201ENSMUST00000192883 259 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm37784-201ENSMUST00000193233 189 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm44768-201ENSMUST00000205719 393 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm18453-201ENSMUST00000208000 626 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.71□□□□□ -1.5
Msx1P13297 Gm45296-201ENSMUST00000209625 205 ntBASIC5.71□□□□□ -1.5
Msx1P13297 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.71□□□□□ -1.5
Msx1P13297 AC145736.2-201ENSMUST00000216305 365 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm18904-201ENSMUST00000218756 329 ntBASIC5.71□□□□□ -1.5
Msx1P13297 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm10095-201ENSMUST00000222765 483 ntBASIC5.71□□□□□ -1.5
Msx1P13297 AC113031.4-201ENSMUST00000228381 514 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Gm5265-201ENSMUST00000076828 342 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Gm25081-201ENSMUST00000082534 108 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Snora30-201ENSMUST00000083325 130 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Gm5347-201ENSMUST00000210542 2327 ntBASIC5.71□□□□□ -1.5
Msx1P13297 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Msx1P13297 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Msx1P13297 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Msx1P13297 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
Msx1P13297 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Msx1P13297 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Msx1P13297 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Msx1P13297 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Msx1P13297 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Msx1P13297 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Msx1P13297 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.7□□□□□ -1.5
Msx1P13297 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.7□□□□□ -1.5
Msx1P13297 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Msx1P13297 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.7□□□□□ -1.5
Msx1P13297 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Msx1P13297 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.7□□□□□ -1.5
Msx1P13297 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms