Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm22345-201ENSMUST00000122644 107 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm22310-201ENSMUST00000157509 116 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Mir6385-201ENSMUST00000184295 105 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm45034-201ENSMUST00000206831 482 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm45189-201ENSMUST00000208567 363 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm29884-201ENSMUST00000218403 453 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Chmp6P0C0A3 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm12294-201ENSMUST00000119723 490 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm11233-201ENSMUST00000122357 634 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm25105-201ENSMUST00000122477 130 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm37219-201ENSMUST00000192036 926 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm18194-201ENSMUST00000210455 481 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm7380-201ENSMUST00000211599 466 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm7034-201ENSMUST00000218638 645 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm18921-201ENSMUST00000221798 366 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Chmp6P0C0A3 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm13122-201ENSMUST00000118380 453 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm11869-201ENSMUST00000118701 329 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm13314-201ENSMUST00000118742 335 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm6584-201ENSMUST00000119671 447 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm12543-201ENSMUST00000120410 543 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm13419-201ENSMUST00000121711 271 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Mir5098-201ENSMUST00000175320 82 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm5829-201ENSMUST00000191383 351 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm43494-201ENSMUST00000197672 388 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm44355-201ENSMUST00000200417 104 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm42758-201ENSMUST00000202146 283 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm34779-201ENSMUST00000210036 263 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.88□□□□□ -1.79
Chmp6P0C0A3 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Gm18441-201ENSMUST00000223539 617 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.88□□□□□ -1.79
Chmp6P0C0A3 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms