Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cbx4O55187 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cbx4O55187 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cbx4O55187 AC134917.1-201ENSMUST00000220517 1449 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Cbx4O55187 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cbx4O55187 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cbx4O55187 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cbx4O55187 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cbx4O55187 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cbx4O55187 Gm6429-201ENSMUST00000117144 475 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm7974-201ENSMUST00000117154 408 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm14854-201ENSMUST00000117758 841 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.19□□□□□ -1.74
Cbx4O55187 Gm15603-201ENSMUST00000119252 492 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm15212-201ENSMUST00000122403 466 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm10444-201ENSMUST00000126708 148 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cbx4O55187 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cbx4O55187 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cbx4O55187 Gm22793-201ENSMUST00000157227 330 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm23022-201ENSMUST00000158768 180 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm8676-201ENSMUST00000184206 637 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm27163-201ENSMUST00000184767 409 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm28263-201ENSMUST00000185884 400 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm18448-201ENSMUST00000186286 599 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Mir5121-201ENSMUST00000198528 74 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.19□□□□□ -1.74
Cbx4O55187 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.19□□□□□ -1.74
Cbx4O55187 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.19□□□□□ -1.74
Cbx4O55187 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.19□□□□□ -1.74
Cbx4O55187 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cbx4O55187 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cbx4O55187 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cbx4O55187 Gm24928-201ENSMUST00000083399 107 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm25897-201ENSMUST00000083709 107 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm22829-201ENSMUST00000083771 106 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cbx4O55187 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.19□□□□□ -1.74
Cbx4O55187 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cbx4O55187 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cbx4O55187 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cbx4O55187 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cbx4O55187 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cbx4O55187 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cbx4O55187 Gm22676-201ENSMUST00000116972 129 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Gm14901-201ENSMUST00000119001 283 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Gm12016-201ENSMUST00000119079 681 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Gm12044-201ENSMUST00000120335 213 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Gm25106-201ENSMUST00000122672 134 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Gm25806-201ENSMUST00000122782 122 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC4.18□□□□□ -1.74
Cbx4O55187 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cbx4O55187 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cbx4O55187 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cbx4O55187 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cbx4O55187 Gm29038-201ENSMUST00000191543 678 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.18□□□□□ -1.74
Cbx4O55187 Gm37670-201ENSMUST00000193622 229 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC4.18□□□□□ -1.74
Cbx4O55187 Gm18414-201ENSMUST00000210858 694 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cbx4O55187 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.18□□□□□ -1.74
Cbx4O55187 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 AC112972.1-201ENSMUST00000227329 365 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
Cbx4O55187 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cbx4O55187 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cbx4O55187 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cbx4O55187 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cbx4O55187 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cbx4O55187 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cbx4O55187 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Cbx4O55187 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.18□□□□□ -1.74
Cbx4O55187 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cbx4O55187 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Cbx4O55187 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.17□□□□□ -1.74
Cbx4O55187 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.17□□□□□ -1.74
Cbx4O55187 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cbx4O55187 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.17□□□□□ -1.74
Cbx4O55187 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Cbx4O55187 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cbx4O55187 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.17□□□□□ -1.74
Cbx4O55187 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cbx4O55187 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cbx4O55187 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 133.5 ms